| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4174 |
|---|
| Symbol | cysS |
|---|
| ID | 5166285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 4834570 |
|---|
| End bp | 4836054 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640551652 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_001232890 |
|---|
| Protein GI | 148266184 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.801152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTGC GTGTATACAA TACCCTTACG GGAACCAAAG AAGATTTCGT ACCGATCGAA
CCGGGAAAAG TCAAAATGTA CGTGTGCGGC GTGACGGTTT ACGACCATTG CCACATCGGC
CATGCCCGTG CCAACGTGGT CTTTGACGTA ATTTACCGCT ACCTCCGGTC ACTGGGCCTG
GAGGTGAACT ATGTGCGCAA CTACACCGAC ATCGACGACA AGATCATCAA CCGGGCCAAC
CGGGAAGGGG TGGCATACGA TGCGATCTCG GAACGCTTCA TCAAGGAGTT TGACCGGGAC
ATGGCGCAAC TCGGCCTCCT GCTCCCCACC AGTCAGCCGA AGGCAACCGA GCACATCCCG
GAGATCATTA CACTGGTGCA AACCCTTATC GATAAAGGGT TTGCCTATCA AATGGGAGGA
GATGTCAACT TCTGCGTGGA GAAGTTCGAC CCGTACCTCA AACTCTCCAA GCGAAATCTG
GAGGATATGC AGGCCGGCGC CAGAATCGAA GTGGACGAGC GGAAACGCCA CCCCATGGAT
TTCGTCCTCT GGAAGGAAGC GAAGCCGGGC GAGCCTTTCT GGGAATCGCC CTGGGGCAAA
GGTCGTCCAG GATGGCACAT AGAATGCTCA GCCATGAGCA TGAAGTACCT GGGGGAGACC
TTCGACATCC ATGGCGGCGG CAAGGACCTG GTATTCCCCC ACCACGAAAA CGAAATCGCC
CAGTCTGAAG CCGCCTCCGG CAAGCCGTTC GTCAAATACT GGCTGCACAA TGGCTTTGTC
AACATCAACT CGGAAAAGAT GAGCAAGTCT CTTGGCAACT TTTTTACCAT CAAAGAGGTG
CTGGATAAGT ACGACAGCGA GGTCCTCCGC TTCTTTCTCC TCTCCGCCCA CTATCGGTCA
CCGCTCGATT TTTCCGACCA GAACCTGACA GAAGCGGAAA CCGGCATGGA GAGGATTTAC
AAGGCGCTGG TTGCCATCGA CGAAACCTTG GCATCAAACC CGGCCACCGG CGGGGAGGAA
ATCGACGCGA GCTCTCTCGG CGAGGCCGAG CGCGAACTCT TCGACAAATC CGGCTCACTG
CCGCTGCGCT TCCGGGAAGC AATGGATGAC GACTTCAATA CTGCTTTGGC AATGGGGCAC
ATCTTTGATC TGGTGCGTTG CGTAAACCGC GTTCTGAGCG AAGCCAAGGA GCGCAGCAAC
ACCTTGTCGG CGCTCTGCGC CCAGGTTAAG GCCAATATCG GAAAGATCGC CGACGTCCTC
GGCATTTTCA CTTCCGAACC GGCATCCTTG CTGACAAGAT TAAAGGATCG AAAAGCGAGC
GAGCTTGATA TTTCTGTTGA AGAAATCGAA CGGCTCATTA CGGAGCGCGC AGCAGCAAGG
AAGGCTAAAG ACTTCAAGCG AAGCGACGAG ATACGGGATT TTCTCCTCGG CAAGAATATT
GTGCTCCTCG ATTCCGCACA AGGGACAAGC TGGAGCGTAA AGTAA
|
|---|
| Protein sequence | MALRVYNTLT GTKEDFVPIE PGKVKMYVCG VTVYDHCHIG HARANVVFDV IYRYLRSLGL
EVNYVRNYTD IDDKIINRAN REGVAYDAIS ERFIKEFDRD MAQLGLLLPT SQPKATEHIP
EIITLVQTLI DKGFAYQMGG DVNFCVEKFD PYLKLSKRNL EDMQAGARIE VDERKRHPMD
FVLWKEAKPG EPFWESPWGK GRPGWHIECS AMSMKYLGET FDIHGGGKDL VFPHHENEIA
QSEAASGKPF VKYWLHNGFV NINSEKMSKS LGNFFTIKEV LDKYDSEVLR FFLLSAHYRS
PLDFSDQNLT EAETGMERIY KALVAIDETL ASNPATGGEE IDASSLGEAE RELFDKSGSL
PLRFREAMDD DFNTALAMGH IFDLVRCVNR VLSEAKERSN TLSALCAQVK ANIGKIADVL
GIFTSEPASL LTRLKDRKAS ELDISVEEIE RLITERAAAR KAKDFKRSDE IRDFLLGKNI
VLLDSAQGTS WSVK
|
|---|
| |