| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4119 |
|---|
| Symbol | |
|---|
| ID | 5162679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4777717 |
|---|
| End bp | 4778634 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640551597 |
|---|
| Product | putative radical SAM protein |
|---|
| Protein accession | YP_001232835 |
|---|
| Protein GI | 148266129 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000155927 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGTT ACAGGATATT TTCCGAAGAG CTGAAGCGGG TATTCGGTTG CCGGGTCCAC
AGAATTTCCG TCGACGCAGG CTTCAGCTGC CCGAACCGGG ACGGGACGGT GGGGAGCGCC
GGCTGCATCT ACTGCGGCGG CGCCGGTTCC GGCTCGTTCG GCATTGTCCG CGGGGCCTCC
GTAGCCGAAC AGCTTGAACA CGGCAAAGAG GTGATGGTGC GGAAATACAA GGCGAAAAAA
TTCCTCGCCT ATTTCCAGCC CTACTCCAAC ACCTATGCCC CTGCGGAACG GCTGCGCGCC
ATTTACGACG AGGCCCTGGC CGTTGAAGAC GTGGTCGGGC TGATCGTCGG CACGCGCCCC
GACTGCCTCC CGGCGGAGAC GCTCGACCTC CTCGCCGAAT ACGCGCAACG GACCTATTTC
TGGCTGGAGC TCGGGTTGCA GTCCCACCTC GACCGCACCT TAAGCCTGAT CGGCCGGGGA
CACGATTTCT CCTCCTTTAC CCGTGCGGTA AAGGAGTGCA AGGACAGGCA TATAAGGGTC
AGCGCCCATG TCATCCTCGG TCTCCCCGGC GAGAGTCGCG AGGAGATGCT GGCCGGCGCC
GACATCCTCA ACGCACTGGG CGTGGACGGG GTGAAGATCC ACCTCCTCCA CGTGATGCGC
GATACAAAGC TCGCCGATGA CTATCTGCAT GGTAGGGTAA AAGTGATGGA GCGTGACGAA
TACGTGGGGG TGGTCTGCGA CTATCTGGAG CGGCTCGACC CAAAGATCAT CGTCCAGCGC
CTGACCGGCG ACGGCAACCG GGACCATCTT CTTGCCCCCC TCTGGTCGTT GAAGAAATTC
GAGGTGCTGA ACACCATCGA TTCAGAGCTG GAGCGGCGGG GGAGTTATCA GGGGAGCGGG
GTGAAACCTT TACTTTGA
|
|---|
| Protein sequence | MKRYRIFSEE LKRVFGCRVH RISVDAGFSC PNRDGTVGSA GCIYCGGAGS GSFGIVRGAS
VAEQLEHGKE VMVRKYKAKK FLAYFQPYSN TYAPAERLRA IYDEALAVED VVGLIVGTRP
DCLPAETLDL LAEYAQRTYF WLELGLQSHL DRTLSLIGRG HDFSSFTRAV KECKDRHIRV
SAHVILGLPG ESREEMLAGA DILNALGVDG VKIHLLHVMR DTKLADDYLH GRVKVMERDE
YVGVVCDYLE RLDPKIIVQR LTGDGNRDHL LAPLWSLKKF EVLNTIDSEL ERRGSYQGSG
VKPLL
|
|---|
| |