Gene Gura_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_4108 
Symbol 
ID5166626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4762808 
End bp4763563 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID640551586 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG 
Protein accessionYP_001232824 
Protein GI148266118 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGTC TTCTTAAGGC TTATGAACAA GAGGCCCAGC GCGCCGTGAT TCCCGACAGG 
GATGAACTGG TTGTTTCCCA TCTTCCCCTG GTTAAATTCC TTGTGGACAG GATAGCGTCG
GCACTTCCTC CCCATCTGGA CCGGGACGAC CTGCGGAGCG CTGCCGTCAT CGGGCTGATC
TCTGCGGCGG AGCGCTTTGA TCCTTCGCGG GGGGTTATGT TCAAGACGTT TGCCGAGCAG
CGGATCAGGG GGACCATAAT GGATGAGCTC CGTTCACAGG ACTGGCTTAC CCGCTCCCTC
CGGGACAAAT TCAAAAGGCT CGAACGGGAA TTTTCATGCC TGGAGCAGCG CCTCGGCAGA
AATCCCACGA GCGAAGAGGT CGCTGCCGCC ATGGGGCTGG AGCTGGAGGG ATATTTCCAC
CTTCTCGAGG AGATCCATTT TCTCTCCTTT GTGAGCCTCG ATGATGCCTG GATGGATGAA
GACGGCAGCC CGTTGGGTCT TCTGGACGTA CTGGAGGACA AGGGTGTCGA GAGCCCCCAG
AATCAGCTCA TAGCGCGGCA AACGGTTGAA AATCTGGCGG AGGCGATTGA CGGTCTGCCG
GAAAAGGAGC GCATCGTCAT AACTCTCTAT TACTATGAAG AGTTGAATCT GAAGGAGATC
GGCTCCGTAT TGAGCCTGAC CGAATCCCGG ATTTCACAGT TGCACAGTCA GGCGCTTCTC
CGCCTGCGCG GCAGGATGAA GCTCCATAAG CCTTGA
 
Protein sequence
MNCLLKAYEQ EAQRAVIPDR DELVVSHLPL VKFLVDRIAS ALPPHLDRDD LRSAAVIGLI 
SAAERFDPSR GVMFKTFAEQ RIRGTIMDEL RSQDWLTRSL RDKFKRLERE FSCLEQRLGR
NPTSEEVAAA MGLELEGYFH LLEEIHFLSF VSLDDAWMDE DGSPLGLLDV LEDKGVESPQ
NQLIARQTVE NLAEAIDGLP EKERIVITLY YYEELNLKEI GSVLSLTESR ISQLHSQALL
RLRGRMKLHK P