Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_4108 |
Symbol | |
ID | 5166626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4762808 |
End bp | 4763563 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640551586 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_001232824 |
Protein GI | 148266118 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGTC TTCTTAAGGC TTATGAACAA GAGGCCCAGC GCGCCGTGAT TCCCGACAGG GATGAACTGG TTGTTTCCCA TCTTCCCCTG GTTAAATTCC TTGTGGACAG GATAGCGTCG GCACTTCCTC CCCATCTGGA CCGGGACGAC CTGCGGAGCG CTGCCGTCAT CGGGCTGATC TCTGCGGCGG AGCGCTTTGA TCCTTCGCGG GGGGTTATGT TCAAGACGTT TGCCGAGCAG CGGATCAGGG GGACCATAAT GGATGAGCTC CGTTCACAGG ACTGGCTTAC CCGCTCCCTC CGGGACAAAT TCAAAAGGCT CGAACGGGAA TTTTCATGCC TGGAGCAGCG CCTCGGCAGA AATCCCACGA GCGAAGAGGT CGCTGCCGCC ATGGGGCTGG AGCTGGAGGG ATATTTCCAC CTTCTCGAGG AGATCCATTT TCTCTCCTTT GTGAGCCTCG ATGATGCCTG GATGGATGAA GACGGCAGCC CGTTGGGTCT TCTGGACGTA CTGGAGGACA AGGGTGTCGA GAGCCCCCAG AATCAGCTCA TAGCGCGGCA AACGGTTGAA AATCTGGCGG AGGCGATTGA CGGTCTGCCG GAAAAGGAGC GCATCGTCAT AACTCTCTAT TACTATGAAG AGTTGAATCT GAAGGAGATC GGCTCCGTAT TGAGCCTGAC CGAATCCCGG ATTTCACAGT TGCACAGTCA GGCGCTTCTC CGCCTGCGCG GCAGGATGAA GCTCCATAAG CCTTGA
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Protein sequence | MNCLLKAYEQ EAQRAVIPDR DELVVSHLPL VKFLVDRIAS ALPPHLDRDD LRSAAVIGLI SAAERFDPSR GVMFKTFAEQ RIRGTIMDEL RSQDWLTRSL RDKFKRLERE FSCLEQRLGR NPTSEEVAAA MGLELEGYFH LLEEIHFLSF VSLDDAWMDE DGSPLGLLDV LEDKGVESPQ NQLIARQTVE NLAEAIDGLP EKERIVITLY YYEELNLKEI GSVLSLTESR ISQLHSQALL RLRGRMKLHK P
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