Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_4048 |
Symbol | |
ID | 5166827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4708171 |
End bp | 4709934 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640551527 |
Product | DNA primase |
Protein accession | YP_001232765 |
Protein GI | 148266059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.211802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGATGA TTCCGGACGA TAAGGTCAGT GAAGTACGTG AACGTGCGGC AATCCTGGAT GTTATCTCCG ACTACGTAAG CCTCAGGAAG TCGGGTGCGA ATTACCAAGG GCTCTGCCCG TTTCACGGCG AAAAAACACC TTCCTTCAAT GTCAACCCTG GAAGGGGCAT ATTTCACTGT TTCGGTTGCG GGGTTGGTGG GAACGCCATC ACCTTCATCA TGAAAATTGA AGGTCTTACA TTTCCCGAAG CGGTGAAGTT CCTTGCAAAG CGGGTCGGTG TGATCATAGA AGAGCGTCCC CTGACCGCAA CGGAAAAGCG GCAGACCGAT GAACGGGAGC TGTTTTTCAG AATAAATGAA CAGGCGGCAA AGTTTTACCG CCGGGTCCTG GTTCAGGAAC CGGCAGGGGA AGCGGGTCGA CGTTATCTCG AGCGGCGTGG AGTGGATGCC GCTACCTCAG AGGCGTATTG CATCGGGTTT GCGCCGGATA AATGGGACGG CCTTACAAGA TATCTGGAGC AGCAGCGGGT GCCGTTGCCG CTGGCGGAAA AGCTTGGACT GGTTAAGCTC AGAGACTCTG GCGGTTACTA CGACACATTT CGCAACCGTC TGCTGTTTGT CATTGCCGAT ATGCATGGTC GACCGATCGG CTTCGGTGGA CGGGTGCTCG ACGATTCGTT GCCGAAATAC ATAAATTCGC CGGAATCTCC GATCTACCAT AAGAGCGAGG TGCTTTTCGG TTTAAATCTG GCCAAGCAGG CCATGCGCGA GCAGGGAACG GCGATCATAG TCGAAGGGTA CTTTGATCAT CTGGCCCTAT TCCAGGCAGG GGTGAGAAAT GTCGTCGCCA CCTGCGGCAC TGCCATGACT GCCGGCCACG TTAAACTCTT GCAGCGCTAT GCGGGCAAGG TCTACACCCT GTTCGACGGG GACAACGCCG GGAAAAAAGC GACCTTGCGC AGCATGGAAC TTTTTCTGGA AGAAAAATAT GCCGCTCACG TGATCGAACT CCCTGCAGGC GATGACCCGG ACAGCTACCT GAAGAAGGAA GGTAGTGAAG CTTTTGCCGG GCAGGTGGCC AAGGCGCGCC CGATATTCGA GTTTTTCCTT TACGACCTGA TGCACCAGTT CGACAGCAGA ACCGTCGAGG GGAAAGTGCA GATCATCGAG CTGTTGACGC CGCGTCTCAT GAAGATTGCC AACCCCATCG AACGGGATTT GTATCTCAAG GAGATATCCA GGATGCTCGG TGTCGACCTG CGGCAACTGC AGAAAAAGAT CGGTCGGTCG CCCATTTCAA CGGCGGATTT GGCTTCTCCG CCGGAGCGGA AAAAACGCGG CATCGGGCCG GAAGAGATGC TCGTTTCACT GATGGGGAAA TACCCGGAGG TGGTAAAGCG GGTCCGGGAA TATGGGGCGG CAAACCTGTT CGGTCCCGAT TTGTTGCCGG TGGTGGAAAC CATCATGACT CAGACGGACG CCGGCAGCGA GGTCGATTGG GGTGTGATCA TGGAGCAGGT CGGGTCGGCT GAGGAGCGGA GCCGCCTTGC TGCGTTGTTC ATGAATGACT GCCACCTGGA AGAGATCGAC GCCAACAAGG CCTTCGATCA GTGTCGTATG AGCCGGGATC GCTCAACGCT GAAGGATAAG GACGTAAAGG AGTTGAAGAG GGAGTTGGCA CAGCTGGATT CGGACTCCGA GCGCTATTGG GAGATATTAA AGATACTCGA TGCCTTGCGA AATAAAAAAT CGCAATTACT ATAG
|
Protein sequence | MSMIPDDKVS EVRERAAILD VISDYVSLRK SGANYQGLCP FHGEKTPSFN VNPGRGIFHC FGCGVGGNAI TFIMKIEGLT FPEAVKFLAK RVGVIIEERP LTATEKRQTD ERELFFRINE QAAKFYRRVL VQEPAGEAGR RYLERRGVDA ATSEAYCIGF APDKWDGLTR YLEQQRVPLP LAEKLGLVKL RDSGGYYDTF RNRLLFVIAD MHGRPIGFGG RVLDDSLPKY INSPESPIYH KSEVLFGLNL AKQAMREQGT AIIVEGYFDH LALFQAGVRN VVATCGTAMT AGHVKLLQRY AGKVYTLFDG DNAGKKATLR SMELFLEEKY AAHVIELPAG DDPDSYLKKE GSEAFAGQVA KARPIFEFFL YDLMHQFDSR TVEGKVQIIE LLTPRLMKIA NPIERDLYLK EISRMLGVDL RQLQKKIGRS PISTADLASP PERKKRGIGP EEMLVSLMGK YPEVVKRVRE YGAANLFGPD LLPVVETIMT QTDAGSEVDW GVIMEQVGSA EERSRLAALF MNDCHLEEID ANKAFDQCRM SRDRSTLKDK DVKELKRELA QLDSDSERYW EILKILDALR NKKSQLL
|
| |