Gene Gura_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_3950 
Symbol 
ID5163777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4595376 
End bp4596218 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content56% 
IMG OID640551429 
ProductRNA polymerase, sigma 32 subunit, RpoH 
Protein accessionYP_001232669 
Protein GI148265963 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000446037 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCAG TAGTCGATAA TTTGAGTTTA TACCTGGCGG AAATAAGACG CTTTCCGGTT 
CTTTCTGCGG AAGAGGAGCA CGGGTTAGCC GTCAAGCTCT ACGAAGAGAA GGATCTGGAG
GCGGCCCACA GGCTCATTAC CTCCAACCTG CGCTTTGTGG TCAAGATTGC CGGGGAATAC
CGTTCTTACG GCATGAAAAT GCTCGACCTG ATCCAGGAAG GGAATATCGG CCTGATGATG
GCGGTGCGTA AATTCAATCC ATACAAGGGA TTCCGTCTTA TTTCCTATGC AGTCTGGTGG
ATAAGGGCCT ATATCCAGAA CCATATCGTC TCGACCTGGA GCCTGTTGAA GATAGGGACC
ACCCAGGCGC AGCGGAAACT TTTTTTCAAG CTGAACCAGG CCAAGAGCGC GATCAGAAGC
ATGACCGGAG GCGGCGACGA CCTCCAGGCT GCGGCGCTTT CCCTCGATGT GAAGGAATCC
GAGGCGCAGG AGATGGACCA GCGCATGCGC GGCGATTATT TCCTCGATGC CGAGGTTGTT
ACCGGCGAAG GTCTGACCAT GCTGGAAAGT CTCCCCGATG AGCGCCGGAA CCAGGAGGAA
CTCTTGGGCG AGGCAGAGGA AAGCGCCATA CTGGAAAGGG AGGTGGCCGC GGCGCTGACC
TGCCTGAATG AAAAGGAACG CTATGTGATT GAGCAGAGGG TCTCTTCTGA TGAACCCTTG
ACCCTCCAGG AGATCGCTGA TCATTTCTCC ATCTCCCGGG AACGGGTACG GCAGATCGAG
GAAGGCGCCC TGAAAAAAAT GAAGCGGGCA CTCCTGCCGC TCGCGACCCG GGCCGTTGCC
TGA
 
Protein sequence
MPAVVDNLSL YLAEIRRFPV LSAEEEHGLA VKLYEEKDLE AAHRLITSNL RFVVKIAGEY 
RSYGMKMLDL IQEGNIGLMM AVRKFNPYKG FRLISYAVWW IRAYIQNHIV STWSLLKIGT
TQAQRKLFFK LNQAKSAIRS MTGGGDDLQA AALSLDVKES EAQEMDQRMR GDYFLDAEVV
TGEGLTMLES LPDERRNQEE LLGEAEESAI LEREVAAALT CLNEKERYVI EQRVSSDEPL
TLQEIADHFS ISRERVRQIE EGALKKMKRA LLPLATRAVA