Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3950 |
Symbol | |
ID | 5163777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4595376 |
End bp | 4596218 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640551429 |
Product | RNA polymerase, sigma 32 subunit, RpoH |
Protein accession | YP_001232669 |
Protein GI | 148265963 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000446037 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCAG TAGTCGATAA TTTGAGTTTA TACCTGGCGG AAATAAGACG CTTTCCGGTT CTTTCTGCGG AAGAGGAGCA CGGGTTAGCC GTCAAGCTCT ACGAAGAGAA GGATCTGGAG GCGGCCCACA GGCTCATTAC CTCCAACCTG CGCTTTGTGG TCAAGATTGC CGGGGAATAC CGTTCTTACG GCATGAAAAT GCTCGACCTG ATCCAGGAAG GGAATATCGG CCTGATGATG GCGGTGCGTA AATTCAATCC ATACAAGGGA TTCCGTCTTA TTTCCTATGC AGTCTGGTGG ATAAGGGCCT ATATCCAGAA CCATATCGTC TCGACCTGGA GCCTGTTGAA GATAGGGACC ACCCAGGCGC AGCGGAAACT TTTTTTCAAG CTGAACCAGG CCAAGAGCGC GATCAGAAGC ATGACCGGAG GCGGCGACGA CCTCCAGGCT GCGGCGCTTT CCCTCGATGT GAAGGAATCC GAGGCGCAGG AGATGGACCA GCGCATGCGC GGCGATTATT TCCTCGATGC CGAGGTTGTT ACCGGCGAAG GTCTGACCAT GCTGGAAAGT CTCCCCGATG AGCGCCGGAA CCAGGAGGAA CTCTTGGGCG AGGCAGAGGA AAGCGCCATA CTGGAAAGGG AGGTGGCCGC GGCGCTGACC TGCCTGAATG AAAAGGAACG CTATGTGATT GAGCAGAGGG TCTCTTCTGA TGAACCCTTG ACCCTCCAGG AGATCGCTGA TCATTTCTCC ATCTCCCGGG AACGGGTACG GCAGATCGAG GAAGGCGCCC TGAAAAAAAT GAAGCGGGCA CTCCTGCCGC TCGCGACCCG GGCCGTTGCC TGA
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Protein sequence | MPAVVDNLSL YLAEIRRFPV LSAEEEHGLA VKLYEEKDLE AAHRLITSNL RFVVKIAGEY RSYGMKMLDL IQEGNIGLMM AVRKFNPYKG FRLISYAVWW IRAYIQNHIV STWSLLKIGT TQAQRKLFFK LNQAKSAIRS MTGGGDDLQA AALSLDVKES EAQEMDQRMR GDYFLDAEVV TGEGLTMLES LPDERRNQEE LLGEAEESAI LEREVAAALT CLNEKERYVI EQRVSSDEPL TLQEIADHFS ISRERVRQIE EGALKKMKRA LLPLATRAVA
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