Gene Gura_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_3947 
Symbol 
ID5165209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4592608 
End bp4593210 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content53% 
IMG OID640551426 
Productmembrane lipoprotein lipid attachment site 
Protein accessionYP_001232666 
Protein GI148265960 
COG category[R] General function prediction only 
COG ID[COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) 
TIGRFAM ID[TIGR02722] uncharacterized proteobacterial lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.91679e-09 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATATC TACGTAGCTT GTTGCTCTGT CTTTCAATTG CCGCCATGTT TCTGGCCGGT 
TGCGCCACCA CCACTGTCCA GTATGGTGAT GCCGGATCGG CAAAGCCGAT CGGCACCGAT
TTCGGCTCGT CCGATCTGCA GCAGATTGCC GAGGCAATGG TTGATTCCCT GATCACTTTT
CCACCAGTAG CCGAGCAGAC CAGCCAGCGG CGACCCGTTT TGAGCGTGGA CAAGGTGAAG
AACAAAACCA TGCAGCACAT AGATACGGAG TCGGTAACCG ACTCGATCAG GGCAAAACTG
ATCAAATCCG GCAAGTTCCG TTTTATTGAC CGGACCACGG ATGAAGCAGC CGTAGAGGAG
ATCAAGACCC AACAGGAAAG CGGCCTGGTT GATAAGAAGA CCGCCGTCGA GTTCGGCCGG
CAGATCGGCG CGGAATTTCT GCTGACCGCA AATTTCGCTG AAATCGTGCA GAAGGCGGGC
AGTGTTACAG ATGTCTATTA TAAGTTCACC ATGAACCTGA AGAACCTGAA AACGGGCATT
CTCGAATGGT CGGACGAGAA GGAGATCCGC AAGATCTCCA AACGGTCCAT GTTTGGGGGG
TAG
 
Protein sequence
MRYLRSLLLC LSIAAMFLAG CATTTVQYGD AGSAKPIGTD FGSSDLQQIA EAMVDSLITF 
PPVAEQTSQR RPVLSVDKVK NKTMQHIDTE SVTDSIRAKL IKSGKFRFID RTTDEAAVEE
IKTQQESGLV DKKTAVEFGR QIGAEFLLTA NFAEIVQKAG SVTDVYYKFT MNLKNLKTGI
LEWSDEKEIR KISKRSMFGG