| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3914 |
|---|
| Symbol | |
|---|
| ID | 5164307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 4563176 |
|---|
| End bp | 4564024 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640551396 |
|---|
| Product | apurinic endonuclease Apn1 |
|---|
| Protein accession | YP_001232636 |
|---|
| Protein GI | 148265930 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACT TAGGCGCGCA CATGTCCATT GCCGGCGGCC TGCACAACGC CCCCGATCGG
GGCGTGAAAG CCGGCTGCGG CGTGATCCAG GTTTTCACCC AGAACTCCAA CCAGTGGCGC
GGCAAGGCGA TCTCGGACCC GGATGTCGCC CTCTTCAAAG AAAAATTGAA GGAATCGGGC
CTCCACGAAA TCATCAGTCA CGACATCTAC CTCATCAACC TTGCCGCAGC GCCCGGCGAG
GTGCGGGACA AGAGCCTGGC CGGCTTTCAG GAAGAGATGG AACGCTGCGC CCGTCTCGGC
ATCGGCAAGA TCGTCATGCA CCCGGGCGCC CACAATGGTG ACGGCGAAGA AACAGGGCTC
CGGCGGATCG TCGAGGCCTT CGACCATCTC TTCGAAAATA CGCCCGCCTA CACCGGCATG
ATCCTCCTGG AAACCACTGC CGGCCAGGGA ACCAACGTCG GCTACACCTT CGAGCACCTG
CGGGCGATCA TCGACGGTTC GGCCCATCCC GGCCGCTTCG GCATCTGCTA CGACACCTGC
CACACCTTCG CCGCCGGCTA CGACATCACC AGCGAAGCGG GCTACAAGGC GGTCTGGGAG
GAGTTCGACC GGATCATCGG CATCGACCGG CTGCAATGCT TCCACATCAA CGACTCAAAA
AAGGGACTCA ACTGCCGTGT GGACCGTCAC GAGCACATCG GTCAGGGAGC CATTGGGTTA
AGCGCCTTCC GCTTCATCAT GAACGACCCG CGTTTCGTCA AAATCCCCAA GATCCTGGAG
ACCCCCAAGG GGGACAACGA CGAGATGGAC GGGGTAAATT TGAAAACTCT GCGTGATCTG
GTGGAATAG
|
|---|
| Protein sequence | MDYLGAHMSI AGGLHNAPDR GVKAGCGVIQ VFTQNSNQWR GKAISDPDVA LFKEKLKESG
LHEIISHDIY LINLAAAPGE VRDKSLAGFQ EEMERCARLG IGKIVMHPGA HNGDGEETGL
RRIVEAFDHL FENTPAYTGM ILLETTAGQG TNVGYTFEHL RAIIDGSAHP GRFGICYDTC
HTFAAGYDIT SEAGYKAVWE EFDRIIGIDR LQCFHINDSK KGLNCRVDRH EHIGQGAIGL
SAFRFIMNDP RFVKIPKILE TPKGDNDEMD GVNLKTLRDL VE
|
|---|
| |