Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3872 |
Symbol | |
ID | 5165295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4518986 |
End bp | 4520743 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640551354 |
Product | ABC transporter related |
Protein accession | YP_001232594 |
Protein GI | 148265888 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTC AATTACAGTC ACAGGGTGCT CTGCGCACCC TTTTGCCGTA TATGCGGATC TATCGGGCGC GCCTTGCCCT GGTGCTCTGC CTGGTAATTA CCGTGGTCCT CATCGACCTG GCGCAGCCTT ATCTGGTCAA AGAGGCCATA GACCGCTATC TGGTGGTGCC GAACCCCAAT GCCGAAGCCA TTTTCTGGAT GGCGGCAGGG TATCTCGGGA TGTCGCTCCT CTCTTTCGGC CTGACCTATT ACCAGGACAT CCTCTTGCAG TACGCAGGTC AAGCCATTGT CAGGAGCATC CGAGTCGACC TGTTCAAGCA TATTCAGAAA CTCTCCCTGC GCTATTTCGA TCAACATTCT GCGGGGAGCA TCATCACCAA TGTTGTCAAC GACACGGAGT CCATCAACAA TTTCTTTACC CAGTTCCTGC CGAACACGTT ACGCGGCTGT CTTTCCCTGA TCCTGATCAT GTTTTTCATG CTCCGGCTGG ATATTCCCAT CGCACTCTAC TGTTTTCTCC TGATCCCGAT AGTTTTGATT ATTTCTCTCT CCCTGAGAAG AATATTAAGC AAGACCTACC GGGAGATCCG GAGCCGCCTG TCGGCAACCA TTGCCTTTCT TGCCGAGAAC CTGACCGGGA TGGCCATTGT CCAGATCTTC AATCAGGAGG CCAAACAGCA AAGGAAGTTC GACGAGAAGA ACAAGGCCCT GCTGGACGCG ACAATCTTCG AGAACCGGAT CAACGTCCTC CTGAACAACC TCACCGAATT GGTGGGTGAT CTGGGGGTGG CGGCACTGGT ATGGTTCGGC GGCCGGGCGG TTATTCACGG GGCGGTCTCT TTCGGGGTGC TCTATGCGTT TGTCGGCTAT GTGAGGCGGT TTTTCCAGCC GATCAACATA ATCACCCAGC AATTCAACGT GCTGCAATCT TCCATTGTCG CCTCGGAACG GATCGCCCGG ACCCTGCAGG AACAGCCGGA AATCAGGGAG CTGCCGGGAG CGTTGGCCCC GTCGGTGCAT GGTCGGGTAA GGTTTGAACA GGTCTCACTC GCCTACCGGC CGGGACATCC CGTCCTCAAC AAGATCCAGC TGGCGATTCA AGCCGGGGAA CGGGTCGGTT TCGTCGGCGC GTCGGGCGCC GGCAAGTCAT CGCTGATGAA CCTGGTAACC AGGTTTTATG ACGTAACCGC CGGGGTAGTG GTGATCGACG GTAAAGATGT CCGGGAATGG CCGCTTGATG CCTTGCGGCA GACGGTGGGC ATAGTCCAGC AGGATGTCAC CCTCTTTTCC GGGACCATCA TCGACAATAT CCGGTTTTTC CGGGAAGAGA TCCCGGCGGA GCGGGTGAAA GAGGCCTGCC GCCTGATCGG CGCCGAGCCT TTCATCCTGA AGCAGCCGAA AGGGTATGAC ACCATGTTGT CGGAACGGGG GAGCACGCTG TCTTCGGGTG AACGGCAGCT CCTGTCATTT GCGCGCGTAC TGGTGTTCGA CCCGAAGATC CTGATCCTCG ATGAAGCGAC CGCCAGCCTG GACTCCAATA CCGAGGCGGT ATTGCAGGCG GCAATCCACC GGGTTTCGCA AGGGCGCACC CTGATGGTCA TTGCCCACCG TCTATCCACG GTGCAGGAAA TGGATGCCAT CGTCGTGCTC GACCAGGGAA AGATCGTCGA AACCGGCAAC CATCACGAGC TGTTGCAGCG ACAGGGGTAT TACTGGCGGC TGCACCAGTC GGGAATACTG CTGGAGGAAG CGGTATGA
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Protein sequence | MSTQLQSQGA LRTLLPYMRI YRARLALVLC LVITVVLIDL AQPYLVKEAI DRYLVVPNPN AEAIFWMAAG YLGMSLLSFG LTYYQDILLQ YAGQAIVRSI RVDLFKHIQK LSLRYFDQHS AGSIITNVVN DTESINNFFT QFLPNTLRGC LSLILIMFFM LRLDIPIALY CFLLIPIVLI ISLSLRRILS KTYREIRSRL SATIAFLAEN LTGMAIVQIF NQEAKQQRKF DEKNKALLDA TIFENRINVL LNNLTELVGD LGVAALVWFG GRAVIHGAVS FGVLYAFVGY VRRFFQPINI ITQQFNVLQS SIVASERIAR TLQEQPEIRE LPGALAPSVH GRVRFEQVSL AYRPGHPVLN KIQLAIQAGE RVGFVGASGA GKSSLMNLVT RFYDVTAGVV VIDGKDVREW PLDALRQTVG IVQQDVTLFS GTIIDNIRFF REEIPAERVK EACRLIGAEP FILKQPKGYD TMLSERGSTL SSGERQLLSF ARVLVFDPKI LILDEATASL DSNTEAVLQA AIHRVSQGRT LMVIAHRLST VQEMDAIVVL DQGKIVETGN HHELLQRQGY YWRLHQSGIL LEEAV
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