| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3674 |
|---|
| Symbol | |
|---|
| ID | 5167068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 4302994 |
|---|
| End bp | 4303809 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640551158 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_001232400 |
|---|
| Protein GI | 148265694 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000210718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAC TCCCTGAAGT TGAAACCACC CGTCGCGGCA TTGCACCTTA CCTGGTGGGA
AAGCGTATCT GCCGGGTTAC GGTTCGCACC GCCAAACTTC GCCTCCCCTT ACAGCCGGAT
CTCGATTCCA TTCTCTCCGG CCGGATCATT TCAGCGGTGG AGCGGCGAGG CAAGTACCTC
CTCGTGCGCT TTACCGCCGG AACCCTTATC CTCCACCTGG GGATGACCGG CAATCTGCGT
CTGGTACAGG CGGATACGCC GCCAGGCAGG CACGATCATC TCGACCTTGT ACTCAACAGC
GGTCTTTGCC TGCGGTTAAC CGATCCGCGC CGCTTCAGCA CAATCGTCTG GACCCATGAC
GATCCCCTGC GCCACACGCT GCTGGCAAAG CACGGCCCCG AACCACTGAC GGGCGACTTT
TCCGGCGATT ACCTCTACAC GAAAAGCCGC GGCCGCAGGA TAACTGTCAA GCAGTTCATC
ATGGACAGCC GGGTGCTGGC GGGAGTTGGA AACATCTATG CCTGCGAAGC GCTGTTTCGT
GCCGGCATCC ACCCTGAAAC ACCTGCCGGA GCCCTTTCTA CAACACACTG TCTTCGGCTG
GCCGATACCA TCAAAGAGGT GTTGACAGAC GCCATCGCCA GCGGCGGCAG CACTCTTGGT
GATTTCCTCG TCAGCGAAGG GAAACCGGGC TATTTTCCCA TGAGTTTCTC CGTTTACGGC
CGTAACGACG CCCCCTGTCC CGGCTGTGGC GCGCCGATCC GGCGCAGCCG ACAGGGGGGA
AGATCCACCT ATTTCTGCGA CAGATGCCAG CATTGA
|
|---|
| Protein sequence | MPELPEVETT RRGIAPYLVG KRICRVTVRT AKLRLPLQPD LDSILSGRII SAVERRGKYL
LVRFTAGTLI LHLGMTGNLR LVQADTPPGR HDHLDLVLNS GLCLRLTDPR RFSTIVWTHD
DPLRHTLLAK HGPEPLTGDF SGDYLYTKSR GRRITVKQFI MDSRVLAGVG NIYACEALFR
AGIHPETPAG ALSTTHCLRL ADTIKEVLTD AIASGGSTLG DFLVSEGKPG YFPMSFSVYG
RNDAPCPGCG APIRRSRQGG RSTYFCDRCQ H
|
|---|
| |