| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3281 |
|---|
| Symbol | |
|---|
| ID | 5164271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3853661 |
|---|
| End bp | 3855871 |
|---|
| Gene Length | 2211 bp |
|---|
| Protein Length | 736 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640550769 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001232013 |
|---|
| Protein GI | 148265307 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.494868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACT TGAAACTTAG TCATCGTCTT GTCGGTTCTT TTATGATAAT GGCCCTGATT
GTCGCCATAA CCGGCGCTTT CGGCTCCTGG AGCATGAGGC GGGTCGGCGA CCAGATTCAG
AACATCATGC AGAATCTGGC CAGCCAGCAG AAACTGGTTC TGCTCATGGG GGTAACGCAG
AAATATTGTC ATGTCAGTCT CATGCAGGCG GCGCTGGTGC GTGCCGAAAT GGAAAAATTT
GAAGAGTATG CCGAAGATTA CCGGATGAAG CGGGATCTCT TCAGAAGCCA GTGCAACATC
ATGTTGAAAG GCAATGCGAA GCTGGGGATC AAGCCTGCGC AGCATGGGAG CGTTATCGAA
AAACGGACCC AGGCGGCCCT TGCCAGTTGG GAAGAGGTCG AGAAGATTGC CGACGAGCTT
CTCGCCCGCA AGGAAGCGTT GCTGAAAGGG CTCAAAGCCG GCGTCGTCGA TCAGGCGGCC
ATGGCTGCCC TTGCCGATGA AAAATTGCAT CGTCTCACGG AAGACGACAT AAATCCTGCC
ATAGAAAAAG CCAAAGCCGA TGCCGACGAC CTGCTTGTTG AGGTGGGTAT CCAGATGACC
AAGGCGGACA AGCAGGTCCG CGAAATTCAG AGTTCTGCGG GAATTGCCTT TGTTGTGGTA
ATCATCGCCG CCGTCCTGCT TGGGCTTTTA TTGGGGCTCA AGACCACGAA GAACATCGTC
AACCGCATCA ATAGAATGGC CAGAGCCCTG GATAACGGCG CGGAGGGGGA CCTTACCGCC
AAGCTTGAAA TCGACTCAGG GGACGAGCTT GGCAAGTTGG GGAGCGATTT CAATGTAATG
GTGGAGAAAT TGTCCGGAAT GGTCGGCAAT GTCAACAAGT CCGCGGCTGA ATTGACCCAT
TTATCCGGCA CTATTACCGA ATCTTCGCAA AAAGTCGTGA ATACGGCCAA ATTGCAGGCA
GAGAGCGTCA ACAATACCTC GGCGGCGGTG AGCCAGATCA ACGCATCAGT CAAAGGGGTT
TCCCAGGGTG TTGACAGTCT TTCCCTATCC GCTTCGGAAA GTTCCTCATC GATTCTGGAG
ATGGCAGCCA GCGTTGAAGA GGTGGCCCAG AATGTTGAAA CCCTGTCGCA CTCTGTCGAT
GAGGTGAGCT CATCCATCCT CCAGATGGCT GCTTCCATCA AGCAGGTGGG TAACGGCGTC
GTCAGCCTCC TGGATGCTTC GACCACCACC GCATCATCGG TCATGGAGAT GGACAGCAGC
ATCAAGCAGG TGGAGAAAAA TGCCATGGAG ACCGCCGCCA TATCCGATGC GGTCCGCAAG
GATGCCGAGA CCGGCAAAGA AGCGGTGGAG GCTACCATCG CCGGCATCAA TGAAATTAAA
CGTTCGTCGC GCATCACCTA TGAAGTTATT GACACCCTCT CCGGCAGGGC CAATGATATC
GGGACAATCC TTTCGGTAAT CGACGAGGTT GCCGAGCAGA CCAACCTCCT GGCGCTGAAT
GCGGCTATTA TTGCTGCCCA GGCCGGTGAG CACGGCAAGG GTTTTGCCGT TGTCGCAGAT
GAGATAAAGG AGCTTGCCGA GCGCACCAGC AGCTCCACCC GCGAGATTGC GATGGTTATA
AAGGCGGTAC AGGACGAAAC TCACCGGGCG GTTAATGCCA TTGACCAGGC GGAAAAAAGC
ATTGCAGACG GTGAACTGTT GTCGCAGAAA TCGGGCGAGG CGTTGAACAA GATCGTATCG
GGTGTGAAGA AGGCAACGGA GCAGGTGGAA GAAATAGCCC GCGCTACCGT CGAGCAGGCG
AGGGGAAGTC AGATGATCCG TGATGCCATG GAGCAGGTCT CCGAAATGGT CGGTCAGATC
GCCAAGGCTA CCCGTGAGCA GGGACAGGGG AGCGAGCTCA TTATGACCGC GGTGGAGAAA
ATGAAGACCC TCACGACCCA GGTGAGGTCT TCGACCCGTG AACAGAGCAA TGTCGGTAAT
TTTATCGCCC AGTCCACAGA AAATATTACA GATATGATCC AACAGATCAA GCGAGCCTGT
GACGAGCAAA ATCGCGGAAG CGAGCAGATT GTGGTCGCTG TTGAGGATAT TCAGCAATCA
ACCCATATCA ACCTTGAAGC GACAGGGGCG ATGGATGAAG CTGTTTCCGG CTTGTTCCGT
CAGATAGAGA TTCTTCGCAA CGAGATGGGC ATGTTCAAGA TTGAAGGGTG A
|
|---|
| Protein sequence | MKNLKLSHRL VGSFMIMALI VAITGAFGSW SMRRVGDQIQ NIMQNLASQQ KLVLLMGVTQ
KYCHVSLMQA ALVRAEMEKF EEYAEDYRMK RDLFRSQCNI MLKGNAKLGI KPAQHGSVIE
KRTQAALASW EEVEKIADEL LARKEALLKG LKAGVVDQAA MAALADEKLH RLTEDDINPA
IEKAKADADD LLVEVGIQMT KADKQVREIQ SSAGIAFVVV IIAAVLLGLL LGLKTTKNIV
NRINRMARAL DNGAEGDLTA KLEIDSGDEL GKLGSDFNVM VEKLSGMVGN VNKSAAELTH
LSGTITESSQ KVVNTAKLQA ESVNNTSAAV SQINASVKGV SQGVDSLSLS ASESSSSILE
MAASVEEVAQ NVETLSHSVD EVSSSILQMA ASIKQVGNGV VSLLDASTTT ASSVMEMDSS
IKQVEKNAME TAAISDAVRK DAETGKEAVE ATIAGINEIK RSSRITYEVI DTLSGRANDI
GTILSVIDEV AEQTNLLALN AAIIAAQAGE HGKGFAVVAD EIKELAERTS SSTREIAMVI
KAVQDETHRA VNAIDQAEKS IADGELLSQK SGEALNKIVS GVKKATEQVE EIARATVEQA
RGSQMIRDAM EQVSEMVGQI AKATREQGQG SELIMTAVEK MKTLTTQVRS STREQSNVGN
FIAQSTENIT DMIQQIKRAC DEQNRGSEQI VVAVEDIQQS THINLEATGA MDEAVSGLFR
QIEILRNEMG MFKIEG
|
|---|
| |