Gene Gura_3235 details

Gene Information

• Locus tag: Gura_3235
• Symbol: lpxD
• ID: 5165621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 3797583
• End bp: 3798629
• Gene Length: 1047 bp
• Protein Length: 348 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640550720
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_001231969
• Protein GI: 148265263
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000091945
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAT CCTTAAAAGA ACTGGCAGAG TACCTGGGTG GGCGGGTAAT CGGTGACGAG 
AGCGCCCTTG TTCGCGGTCT TGGCACCCTG GACGATGCGG GGGATGGGCA GATCACCTTC 
CTGGCAAATC CCAAGTACGC GCAAAAAGTC GCCACTACCA ACGCGGCTGC GGTCATTCTC 
CCGCCGGGCG CCGATGGTCA CGGACGGAAT GTCGTCGAGG TTGCCAACCC CTACCTTGCA 
TTCGCCAAGC TTCTTACCCT GTTTTATGTT GCGCCGGCCA AGGCCTATGG GGTCATGGAC 
GGGGCTTTTG TCGGCAAGGC CGTGGCCATG GGGGACGATG TGACGGTTTA CCCGGGGGCT 
TTTGTCGCCG ATGGGGTCAG GCTCGGGAAC CGGGTGACCC TCTACCCCGG CGTAGTGCTC 
TATCCCGGGG TGATACTTGG CGACGACGTT ACGCTCCACG CCAATGTGAG CGTGCGCGAG 
CGGTGCCGGA TCGGCAACCG GGTGACGATC CATAACGGGA CGGTCGTAGG ATGCGACGGG 
TTCGGCTATG CCCCCGACGG CAAAGAGTGG TACAAAATAC CCCAGATCGG CATCGTCATG 
ATTGAGGATG ATGTTGAAAT CGGCTCCAAC ACGGTCATCG ACCGGGCCGC ACTGGAAGTC 
ACGCTGATCA GGCGTGGCAC CAAGATCGAC AACCTGGTGC AGATCGCCCA TAACTGCGTT 
ATCGGTGAAA ATGGCATGAT ATGTTCACAG GTGGGGATCT CCGGCAGCAC CAAGGTGGGG 
AGCCATGTGA CCATGGGGGG GCAGGTCGGG GTGGCAGGCC ACATCCAGAT CGGTGATAAC 
GTCATGGTCG GGGCAAAATC CGGCGTCCCC GGCAACATCC CGGCCAACCA GATCATCAGC 
GGCATCCCCG CTATTCCCCA TCGCGAATGG CTCAAGGCAT CCGGTATCTT TCCCCGCCTG 
CCGGAATATC GCAAGACCCT GGGCGCCCTG GAAAAAAGGG TGGCGGAGCT TGAAAAAATG 
TTGGCCTCTA ATACCAACGA AAAGTGA 

 

Protein sequence

MEKSLKELAE YLGGRVIGDE SALVRGLGTL DDAGDGQITF LANPKYAQKV ATTNAAAVIL 
PPGADGHGRN VVEVANPYLA FAKLLTLFYV APAKAYGVMD GAFVGKAVAM GDDVTVYPGA 
FVADGVRLGN RVTLYPGVVL YPGVILGDDV TLHANVSVRE RCRIGNRVTI HNGTVVGCDG 
FGYAPDGKEW YKIPQIGIVM IEDDVEIGSN TVIDRAALEV TLIRRGTKID NLVQIAHNCV 
IGENGMICSQ VGISGSTKVG SHVTMGGQVG VAGHIQIGDN VMVGAKSGVP GNIPANQIIS 
GIPAIPHREW LKASGIFPRL PEYRKTLGAL EKRVAELEKM LASNTNEK