| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3160 |
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| Symbol | |
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| ID | 5165084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 3730692 |
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| End bp | 3732842 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640550645 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001231894 |
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| Protein GI | 148265188 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000534468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGAC TCAACGACAT TCTGGATAAG GTTGCTTCCT ACAACCCGGC ATGCGACCTG
GATTTAGTCC GAAAGGCGTA CGTCTTCTGT GCCAAGGTGC ACCAGGGGCA GACCCGCCTT
TCCGGCGAGC CTTACCTGGT CCATCCCATG GAAGTGGCGG GGATTCTTGC TGACCTGAAG
CTCGATGTTC CCACGGTGGT CACAGGACTT CTCCATGACA CTGTTGAGGA TACCCTGACC
ACCCTTGAGG AGCTGGAGGG GATGTTCGGC GCCGAGGTTG CCAGGCTGGT TGACGGCGTC
ACCAAAATCG GCAAGATCCA TTTCAAGACC AAGGAGGAAA GCCAGGCGGA AAACTTCCGC
AAGATGCTCC TGGCCATGGC CAATGACATA CGTGTCATTC TGGTCAAACT GGCCGACCGG
TTGCACAACA TGCGCACCCT TCAGTACCAG CCGGAGCCGA AACAGCGCAG CATTGCCAAG
GAGACCCTCG ACATCTATGC ACCGATCGCC AATCGCCTCG GGATCTCCTG GGTGAAGAGC
GAACTGGAAG ATCTGTCGTT CCGCTACCTT GATCCGCAAA TCTACTACGA TCTGGCATCC
AAGGTCACAA AGAAGAAGAA AGAGCGTGAA TCCTATGTGG ATGAGGTCAT GCAGATCATC
AAGGAAAAAC TGGCTGACCA CGGGATCACG GGCGAGGTTT CCGGAAGGAG CAAACATCTC
TACTCCATCT ACCGGAAAAT GCAGAGCCGC AGTGTGGATA TCGACGAAAT CTATGACCTG
GTCGCCATCC GCGTGATGGT CGAGGATATT CGCGAATGCT ATGAGGTGCT GGGGATAATC
CATTCTACCT GGAAGCCGAT TCCCGGCCGG TTCAAGGATT ACATCGCCAT GCCCAAGGGG
AACATGTACC AGTCTCTTCA CACCACCGTC ATCGGGCCTT ATGGCGAGAG GATGGAGGTG
CAGATCAGGA CCGGGGAGAT GCACCGTGTC GCTGAGGCGG GGATTGCCGC CCACTGGAAA
TATAAGGAGG GCAAGGGGTA CGACGAAAAA GAGGTGAAGC GCTTCACCTG GCTCCGGCAG
CTCCTTGAGT GGCAGCAGGA GCTTGACGAT TCGCGGGAAT TCATGGACAC GGTCAAGGTG
GAGCTGTTCC CTGAAGAGGT CTACGTCTTT ACTCCCAAAG GCGATGTCAA GGGGTATCCA
AAGGGCTCGA CCCCCATAGA CTTTGCCTAC AGCGTCCATA CCGATGTGGG CCATCGTTGC
GTTGGCGCCA AGGTAAACGG CAAGCTGGTG CCCCTGAAGT ATGAGCTGAA AAACGGTGAC
ATCGTCGAAG TCATCACCTC CCCGCATCAC ACACCCAGCA AGGATTGGCT GAAGATTGTC
AGAAGTTCCC GGGCGCGGAA CAAGATCCGC GCCTGGATCA AGACCGAGGA ACGTCTGCGT
AGCATTACCC TGGGGCGGGA AATCTGCGAG AAAGAGTTTC GTCGTTATTC GCAGAACTTT
GCCAAAATGC AGAAGACTGG CGAGATAAAA CGGGTGGCGG TGGAATTCGG CTTTGTCGGT
GAAGATGACC TTATGGCGGC GGTTGGTTAT GGAAAGCTGT CCTGTAACCA GATATTGGGC
AAGCTTTTCC CAACAGTGAA AATCGAAGAG GTCCAAGAGC ATAAAGAAAC ACGGATCGGC
AAGGTAATCG CGAAGCTCAA GGGCAAATCC TCCAGCGCCA TTCAGATCAG CGGGGTGGAA
GATGTGCTGG TTCGTTTCGG TAAATGCTGC AATCCTCTCC CCGGCGATGA CATCACAGGT
TTTATTACCA GGGGGCGAGG GGTTACCGTT CATACCGCCG ATTGTCCCGT TGCCTTGGAT
AGTGATCCGG AACGGCGCAT CGATGTGACC TGGAGCAGGG ATAAAAAGGC GGCCCTGCCG
GTTAAAATCA GGGTTGCCTG CCATGATGAG AAGGGAATTC TGGCAAACAT CACTACGGCG
ATCACCAATT GTGAGGCCAA TATCGTGAGC GCCTCCATCC AAAGCACCGT TGACAAGCGC
GGCATCAATA CCTTCGAGGT GGATGTGACC GACCTGGATC ACCTGAACAG GGTCTTCAAC
AGTGTGATGA AGGTGAAGGG CGTGATAAAA GTGGACAGGC TCAAGAGCTG A
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| Protein sequence | MIRLNDILDK VASYNPACDL DLVRKAYVFC AKVHQGQTRL SGEPYLVHPM EVAGILADLK
LDVPTVVTGL LHDTVEDTLT TLEELEGMFG AEVARLVDGV TKIGKIHFKT KEESQAENFR
KMLLAMANDI RVILVKLADR LHNMRTLQYQ PEPKQRSIAK ETLDIYAPIA NRLGISWVKS
ELEDLSFRYL DPQIYYDLAS KVTKKKKERE SYVDEVMQII KEKLADHGIT GEVSGRSKHL
YSIYRKMQSR SVDIDEIYDL VAIRVMVEDI RECYEVLGII HSTWKPIPGR FKDYIAMPKG
NMYQSLHTTV IGPYGERMEV QIRTGEMHRV AEAGIAAHWK YKEGKGYDEK EVKRFTWLRQ
LLEWQQELDD SREFMDTVKV ELFPEEVYVF TPKGDVKGYP KGSTPIDFAY SVHTDVGHRC
VGAKVNGKLV PLKYELKNGD IVEVITSPHH TPSKDWLKIV RSSRARNKIR AWIKTEERLR
SITLGREICE KEFRRYSQNF AKMQKTGEIK RVAVEFGFVG EDDLMAAVGY GKLSCNQILG
KLFPTVKIEE VQEHKETRIG KVIAKLKGKS SSAIQISGVE DVLVRFGKCC NPLPGDDITG
FITRGRGVTV HTADCPVALD SDPERRIDVT WSRDKKAALP VKIRVACHDE KGILANITTA
ITNCEANIVS ASIQSTVDKR GINTFEVDVT DLDHLNRVFN SVMKVKGVIK VDRLKS
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