| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3127 |
|---|
| Symbol | |
|---|
| ID | 5165370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3694797 |
|---|
| End bp | 3696119 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640550612 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_001231861 |
|---|
| Protein GI | 148265155 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00194876 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAAGAG AAAAACTGCT GTACCTCGAA ACTTTCGGCT GCCAGATGAA TGTCAGTGAT
TCGGAAAAAA TCGCAGCGCT GCTGAAAGGG ATCGGTTATT TTCCCACCCA GGACTCATCT
CAGGCTGATC TTGTAATTCT CAATACCTGC AGTGTCAGAG CGAAAGCGGA AGAGAAGGTC
TACAATCATC TTGTCCAGTA CAAGGGGCTG AAACGGAAAA AACCGGGCAT CATTCTCGGG
GTAGGCGGCT GTGTTGCCCA ACAGGAGGGT GAGCGGCTGC TGGCAAATGT CCCACATCTG
GACATCGTAT TCGGAACCCA CAATCTTCAC CTGTTGCCGG AGCTGGTCAG AGCGGCGGAG
AAGGGGGAGC GGCTTGCGGA AGTCGGTTTT ATCGACAACG AAACCAGGCT TGATCTCTTT
CCCGTTGATG AACGGACAGA CGGGGTCTCC CGCTTCGTCA CCGTCATGCA GGGGTGTGAA
AATTTCTGCT CCTACTGCAT CGTCCCTTAT GTGCGCGGAA GGGAGATCAG CCGCCGCTCG
GCAGACATCC TCGGCGAGGT CAGGGGAATG GCGGGAAATG GAGTCAAGGA AGTGACCCTC
CTGGGTCAAA ATGTCAACTC TTACGGTCTC AAAAGTTCCG GCGAGATGAG CTTTATCGCC
CTGTTGCGAG AGGTGTCGCT GATCCCGGGC ATCGAGCGCA TCCGCTTTAC CACTTCCCAT
CCCAAGGATT TTTCTCAGCC GCTGATCGAT TGTTTTGCCG AAATCCCCAA ACTATGCAGA
CATATTCATC TGCCTGCCCA GTCGGGGAGC AACGCGGTGC TGGCGGCAAT GAACAGGGGG
TATACCCGCG AGGAATACCT CGGGTCGATT GCCCGCCTGA AGGCCGCATG TCCTTCGATC
CAGATAACCG GCGACATCAT CGTCGGTTTC CCCGGCGAAA CGGAGGAGGA TTTCCAGGCA
ACCCTGTCGC TCATGGAGGA GGTGAGGTAT ACCGATGTCT TCTCCTTCAT CTATTCAAAA
CGGCCGGAAA CAAAGGCGGC CGGATATGCA GACGAAGTCG GCCAGGATGA AAAGCAGGGG
CGTCTCAGCC GCTTGCTGGA TCTTCAGCGG CGCATCACCC TGGAAACCAA CAAGAGCTTT
GTCGGCACCG TTCAGCAGGT CCTCATCGAA GGGGAGAGCA GGCGGGGGGG ACAGTTTTAC
GGCCGGACTT CGGGGAACAG GGTTGTTAAC CTCGCAGCAG ATGTCTCCCT GGTAGGAAGC
ATCGTCAATG TCATGATTAC CCGCGGTGAT CAGAATTCGT TGCAGGGGGA GCTCTGCCGG
TAG
|
|---|
| Protein sequence | MTREKLLYLE TFGCQMNVSD SEKIAALLKG IGYFPTQDSS QADLVILNTC SVRAKAEEKV
YNHLVQYKGL KRKKPGIILG VGGCVAQQEG ERLLANVPHL DIVFGTHNLH LLPELVRAAE
KGERLAEVGF IDNETRLDLF PVDERTDGVS RFVTVMQGCE NFCSYCIVPY VRGREISRRS
ADILGEVRGM AGNGVKEVTL LGQNVNSYGL KSSGEMSFIA LLREVSLIPG IERIRFTTSH
PKDFSQPLID CFAEIPKLCR HIHLPAQSGS NAVLAAMNRG YTREEYLGSI ARLKAACPSI
QITGDIIVGF PGETEEDFQA TLSLMEEVRY TDVFSFIYSK RPETKAAGYA DEVGQDEKQG
RLSRLLDLQR RITLETNKSF VGTVQQVLIE GESRRGGQFY GRTSGNRVVN LAADVSLVGS
IVNVMITRGD QNSLQGELCR
|
|---|
| |