| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2905 |
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| Symbol | |
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| ID | 5163590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 3368056 |
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| End bp | 3370404 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640550400 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_001231650 |
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| Protein GI | 148264944 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000121326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAAG ACAGCCGTGA AACACTGGGA CTCCGCACGC TGGAAGACAT CAGCGGTTTG
ATTCTCCACT CCCACGATTT ACAGGAGACG CTGGATAATA TAGTCAACCT TGTGGCAAAG
CGAATGGGTT CCGACGTTTG CTCCATCTAC CTTTTGGAAG ACGACGGCGA AACCCTCCGG
CTCAAGGCCA GCAAGGGTCT TTCCAAGGGG TCGGTAGGAA AGATCACCAT GAAGACCTCG
GAAGGCCTCA CCGGCCTGGC TGTGGAGCAG CGGGGAATAG TGGCGACCGA CAATGCCCCG
CTCCATCCAC GCTATAAATA CTTCCGCGAA ACCAAGGAAG AAAAATTCCA GTCCTTTCTG
GGCGTCCCCC TGTTCGAGCG CAAAACGCCC GTCGGCGTAA TAGTCGTTCA AACCCGCGAA
TCGAGGGTCT TCACCCCGGC GGAGATAAGC ACCATCTCCA CCATCGCCTA CCAGATCAGC
AGCATCGTCA TCAACGCCAA GCTACTCGAC TCCGTTCATC AGAAGGAGGA AGAGCGCGCC
TTTTTTGCAC TGGAACTCGA AAAAATGAAG GCCGGCGGCG TCATGGAGGG CGTAACTGCC
GGACCGGCAA AGAAGAGCGC CAAACAGCCG TTCTCGTTGA CCGGGACGGC GGTATCACCC
GGTTTTTCCT GGGGAAAGAT CTATATCCTG AACCGCAACA CAAAGGACTG CATCGAGCTG
GAACGGATCA GACCGCGCCC GGAAGAACGC AAGCGGTTTC AGATCGCCCT GGAAAAGGCG
AAGATCCAGA CACTCTACAT GGAAAAACGT GTGGCTGAGA TACTCTCCAA AGAGGACGCC
GCAATCTTCC ACAGCCACCT CATGATTATG GAAGACCGCG GTTTCGTTGC CAAGATTGTG
GACCTCATAG ACAGTGATTA CGGTGCAAGC CGGGCCGTGA AGGAAGTGGT CGGCTACTAC
GTGCAGGCCT TCTCCAAGAT GGAAGACCCG TACCTGCGGG AACGTTCCGC GGACATGGAA
GACATCGGCC GGCGCATCAT CGATGCCCTC AACGGCAACA GCCGCACTCA GGCGAAGTTC
AGGGAAAAAC GGATAATTGT TGCCGACGAC ATCCTTCCCT CGGACATGGC AACCATGGAC
CATGAAAAAA TCCTCGGCAT TGTCACGGAG AAAGGTAACG TGAATTCCCA TGCCGCCATC
ATGGCCAAAT CCCTCGGTAT TCCGGCGGTG CTCGGCGTGG ATGGTTTAAT GAAGCACATC
GCCCTCCGCA ACGAGGTGAT AGTTGACGGC ACTTCCGGGC ACATCTACAT AAATCCGGAC
AACAGCATAA AGGTCGAGTA CGAAAGACTA CAGCGGGATT TCAGCCTCAA ACAGCGCGAA
CTCGATGGGC TGCGCGACCT GCCGGCTGAA ACCAAAGACG GCGTCAGGGT CTCGCTGCGG
GCAAACATCG GTCTTTTAAA CGATGTCAAG GTTGCACTGG CCAATGGCGC CGAAGGGGTC
GGTCTCTACC GCACGGAATT CCCGTACATG GCCCGCAAAT CCTTTCCCAA CAGGGTTGAA
CAGTACACAC TTTACCGGAA AATACTCGAA GGCTTCCATG GTCACACGGT CGCCATCCGC
ACCCTGGACA TCGGCGGGGA CAAAGGACTT TCCTACTTCG CCTACCCCAA GGAGGACAAC
CCGTTCATGG GGTGGCGCTC CATCAGGGTC TCCCTGGAAG AGGAAGGCAT CTTTCGCGAG
CAGCTCGCCG GAATACTCAT GGCCTCGACC TACGGCAAGG CCACCATCAT GTTCCCGATG
ATTTCGAGTG TCGATGAGAT CAGGACAATC AAGAGGATCT TGAAAGAAGT TCAGAACGAA
CTGGTGCAGG ATGAGAAACC GTTCGATACC GACATCCGAC TCGGGATCAT GGTGGAGATA
CCGGCCGCCG TCCAGATCGC CGACATTCTC ATCAAGGAAG TGGACTTTTT CAGCATCGGC
ACCAACGACC TGATTCAGTA CACCATGGCG GCGGACCGCA ACAACCCGAA GGTGAAAAAA
TACTACGACC CCTATCACCC GGCCGTGCTG CACTCCATCA AACAAGTGGC TGATGCGGCA
AAAAAGGCGC ATAAGCAGGT TTCGCTCTGC GGAGAGATGG CCGCAGACCC GGTTACCGCT
GTGCTCCTGC TCGGCATGGG GATAACGGAT TTTAGTCTGT CGGCCCCATA CATACCTCTC
ATCAAACAGG CAATACGATG CGTGGACATG GCTGAGGCGC GAAGGATCGC CGAACATGCA
CTGCAGATGG AGAGCAGCAG CGCTATCCGC GAATATCTGG AGAAAATAAA GTCAGAGCTC
GGACTATGA
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| Protein sequence | MGEDSRETLG LRTLEDISGL ILHSHDLQET LDNIVNLVAK RMGSDVCSIY LLEDDGETLR
LKASKGLSKG SVGKITMKTS EGLTGLAVEQ RGIVATDNAP LHPRYKYFRE TKEEKFQSFL
GVPLFERKTP VGVIVVQTRE SRVFTPAEIS TISTIAYQIS SIVINAKLLD SVHQKEEERA
FFALELEKMK AGGVMEGVTA GPAKKSAKQP FSLTGTAVSP GFSWGKIYIL NRNTKDCIEL
ERIRPRPEER KRFQIALEKA KIQTLYMEKR VAEILSKEDA AIFHSHLMIM EDRGFVAKIV
DLIDSDYGAS RAVKEVVGYY VQAFSKMEDP YLRERSADME DIGRRIIDAL NGNSRTQAKF
REKRIIVADD ILPSDMATMD HEKILGIVTE KGNVNSHAAI MAKSLGIPAV LGVDGLMKHI
ALRNEVIVDG TSGHIYINPD NSIKVEYERL QRDFSLKQRE LDGLRDLPAE TKDGVRVSLR
ANIGLLNDVK VALANGAEGV GLYRTEFPYM ARKSFPNRVE QYTLYRKILE GFHGHTVAIR
TLDIGGDKGL SYFAYPKEDN PFMGWRSIRV SLEEEGIFRE QLAGILMAST YGKATIMFPM
ISSVDEIRTI KRILKEVQNE LVQDEKPFDT DIRLGIMVEI PAAVQIADIL IKEVDFFSIG
TNDLIQYTMA ADRNNPKVKK YYDPYHPAVL HSIKQVADAA KKAHKQVSLC GEMAADPVTA
VLLLGMGITD FSLSAPYIPL IKQAIRCVDM AEARRIAEHA LQMESSSAIR EYLEKIKSEL
GL
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