| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2854 |
|---|
| Symbol | |
|---|
| ID | 5162769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3313587 |
|---|
| End bp | 3314600 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640550350 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001231600 |
|---|
| Protein GI | 148264894 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG CGATGTTTTA TGAAAAAGTA GGGGATGAAA AGGTTCGCTG CGGTCTTTGC
CGTTTCCGCT GCCTGATTTC TGCCGGCCGG CGGGGCATCT GCATGGTGAG GGAGAACAGA
GCCGGAACTC TCTACACTCT CGTCTACGGC AAGGCCATTG CCGAACATGT GGACCCCATC
GAGAAGAAAC CGCTTTTCCA TGTTCTTCCA GGCAGCAGGT CATATTCCAT TGCTACTGTC
GGCTGCAATT TCCGCTGTCT CCATTGTCAG AATTACGCAA TATCCCAGTC AAGCGCAGGG
GTGATGGATA TAAGCGGGAT TGACCTGGCT CCGGCTGATA TCGTGGCAAA GGCGCTGGCA
ACCGGCTGCA CGTCGATTGC CTACACCTAT ACGGAGCCGA CCATATTCTA TGAATACGCC
TACGACACTG CCGTTCTCGC CCGTGCAGCA GGCCTGAAGA ACATTTTTGT AACCAACGGC
TATATTACAC CTGAAGCGCT TGCCCATATC CGACCCTATC TGGATGCGGC AAATATCGAC
CTTAAGGGTT ATTCCGACCG GTTCTATCGT GAGGTGGTTC ATGCCATGCT CCATGAGGTG
CTCGAATCCA TCGTCGAATA TAAAAGACAG GGTATCTGGA TCGAACTGAC CACCCTGGTC
ATTCCGAACT GGAACGATTC CGATGAGGAT TTGCTGGGCA TTGCCCGTTT CATTGCCGAA
AAGGTCGGCG TTGAGGTCCC GTGGCACGTG ACCCAGTTCT ATCCTACTTA CAAATTGCTG
GACCAGCCGC GCACTCCCGT AGCGACCCTG CGCCGTGCCC GGCAGATAGG GCTCGATGCC
GGCCTGCGCT ATGTTTATGA AGGGAATGTC CCGGGTGAAG GTGGAGAAAG CACTTATTGT
CCGGGATGCG GCGAACTTCT TATCCGCCGC TTCGGTTACG CCATCGATTC AAACCTGCTT
CAAGACGGGA AATGCCCGAA GTGCGCTTTC GTCGTGGACG GCATCTGGAC GTAG
|
|---|
| Protein sequence | MKEAMFYEKV GDEKVRCGLC RFRCLISAGR RGICMVRENR AGTLYTLVYG KAIAEHVDPI
EKKPLFHVLP GSRSYSIATV GCNFRCLHCQ NYAISQSSAG VMDISGIDLA PADIVAKALA
TGCTSIAYTY TEPTIFYEYA YDTAVLARAA GLKNIFVTNG YITPEALAHI RPYLDAANID
LKGYSDRFYR EVVHAMLHEV LESIVEYKRQ GIWIELTTLV IPNWNDSDED LLGIARFIAE
KVGVEVPWHV TQFYPTYKLL DQPRTPVATL RRARQIGLDA GLRYVYEGNV PGEGGESTYC
PGCGELLIRR FGYAIDSNLL QDGKCPKCAF VVDGIWT
|
|---|
| |