| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2853 |
|---|
| Symbol | |
|---|
| ID | 5163331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3311789 |
|---|
| End bp | 3313525 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640550349 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001231599 |
|---|
| Protein GI | 148264893 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAAATG ACTCCAAAAA CAACAAAAAA CACCCCGAAC GCATAATACT GGTTGCGGTC
ACTCTGGTGC TGATGTTCTG GGTGGCCGAT TCGGTGATGG ATGCCCTTAT TTATGGAGAA
GGAACCATTT ATCAGCAGTT GTTCTCTCCC GATTCACGTG AAATCGGCTT TCGTTGGCTG
ACAAGCATGG TGTTTTTCGC GTTTATGCTC TACACCAGGC ATATTGTAAA CAAGCGAAAA
GAGCTGGAAA AGGCGCTGCA GGCGGCGATT CAAAGGGCCG AGGACGAGAC TGAGAAGACC
ATTGCGATTG TTTCGGCCAT GGGAGACGGG ATCAGTATCC AGGATACGGA TTTTAAAATC
CTCTTCCAGA ACGAGGCGCA CAAAAGATTG GTTGGCGATC ACGTCGGTGA GTACTGCTAT
TCTGCCTATA ATAAGAAGGA CCAGCCTTGC GAGGGATGTC ACCTGCTCGA GTCATTCCTG
GACGGCGAGA TCCATCGACG TGAGACGAGC GGGGCAAGTT TACAAGAGGC GACGCACGTG
GAGATCATAT CGTCGCCTCT GCGTGACAAG ACGGGGAAGA TTATCGCCGG CATCGAGGTG
GTGCGGGATA TTTCGCATCG CAAACAGGCG GAAGCTGCCC TCGAACGGCA GGCGAACCTT
TTACAACGGC TTATAGATAC CATACCCAGC CCCATATTCT ACAAGGATAC GCAGGGTGTT
TTTCTCGGCT GCAATACGGC ATTCGAGCAT TGCAGCGGCA TGACAAAGGA GAAGGTCATC
GGCAAGACGG TATTCGATTT GTTCCCGGAT GAAATTGCCG TCATGTACGA TAAAATGGAC
CGGGAGCTGT TCGCCAATCC CGGCGTCCAG GTTTATGAAT CCTTTGTTCC CTGCGTTGAC
AACTGCTCGC GGGATGTGAT CTTCAACAAG GCTACGTATA CCGATAGCGA CGGTGTATTG
GCCGGACTAA TCGGGATTGT CATCGATATT ACCGAGCGCA AGCAGGCGGA ATACGAAATC
AGAAAGCTCA ATGCGGATTT GTCTGCGCAT GCTGCCGAGC TTGACGCTGC AAACAAGGAA
CTGGAGGCGT TCAGCTATTC GGCTTCTCAT GATTTGCGCA CACCGTTGAC GCGGATATAC
AGCTCCAGCC AGGCACTGAT CGAGGGGTAT TCTCATACAC TGGATGAGAA CGGCAGATAT
TTTGTCAGGA CTATTTACGA GGCGTGCGAA CAGATGGAAG AGCTGGTAGA AGCCTTGCTG
GCTTTGTCCA AGGTGACGCG CAGCGAAATG CAGCGTGAGG AAGTCGATAT CAGCCTGCTT
GTGCGGGAAA TTGCCGCCGG CCTTCAACAA GCTGAGCCGG AGCGCCGGGT TGACTTTGAC
ATCACTCCGA ATGTGACGGC TTATGGTGAT CCCCAATTGC TGATGGTGGC GTTGGAAAAC
CTGCTGGGCA ATGCCTGGAA ATATACCAAA AAGTGTGACG AAGCAATGGT CGAATTCGGC
GTGGTCGAAG AAGAAGGCGA AACCGTTTAT TTTATCCGCG ATAACGGCGC GGGCTTTGAC
ATGAATAAGG CTACCAACCT CTTTCAACCT TTTCACCGTC TCCATAATCA AAATGATTTC
CCCGGTACAG GTGTCGGCCT GGCAACGGTG CAGCGTATCA TCCAGCGCCA TGGCGGGAGA
GTCTGGGGTG AAGGCGCGGT GGACAAGGGG GCGACCTTTT ACTTTACCCT CAAGTAG
|
|---|
| Protein sequence | MGNDSKNNKK HPERIILVAV TLVLMFWVAD SVMDALIYGE GTIYQQLFSP DSREIGFRWL
TSMVFFAFML YTRHIVNKRK ELEKALQAAI QRAEDETEKT IAIVSAMGDG ISIQDTDFKI
LFQNEAHKRL VGDHVGEYCY SAYNKKDQPC EGCHLLESFL DGEIHRRETS GASLQEATHV
EIISSPLRDK TGKIIAGIEV VRDISHRKQA EAALERQANL LQRLIDTIPS PIFYKDTQGV
FLGCNTAFEH CSGMTKEKVI GKTVFDLFPD EIAVMYDKMD RELFANPGVQ VYESFVPCVD
NCSRDVIFNK ATYTDSDGVL AGLIGIVIDI TERKQAEYEI RKLNADLSAH AAELDAANKE
LEAFSYSASH DLRTPLTRIY SSSQALIEGY SHTLDENGRY FVRTIYEACE QMEELVEALL
ALSKVTRSEM QREEVDISLL VREIAAGLQQ AEPERRVDFD ITPNVTAYGD PQLLMVALEN
LLGNAWKYTK KCDEAMVEFG VVEEEGETVY FIRDNGAGFD MNKATNLFQP FHRLHNQNDF
PGTGVGLATV QRIIQRHGGR VWGEGAVDKG ATFYFTLK
|
|---|
| |