| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2708 |
|---|
| Symbol | |
|---|
| ID | 5166577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 3150721 |
|---|
| End bp | 3152127 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640550203 |
|---|
| Product | two component, sigma-54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001231455 |
|---|
| Protein GI | 148264749 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA TACTCATAAT CGATGACGAT GACCTGATGT GTCAGTCGTT GTCCCTTGTG
GCAGGCCGCT GGGGGCATGA GGTCACCTGC ACCCACACCC TGGGAGCAGG GCTGGAAAAG
GCCTCCTCAC AGGCGTTCGA CGTGGTTTTT CTCGATGTGA GGATGCCCGA CGGCAACGGG
CTGGACATGA TTCCCAGAAT CGAGGCGACC ACCTCTTCCC CGGAAATCAT CATCATGACC
GGCTTCGGCA ACCCTTTGGG GGCAGAACTG GCCATCAAGA GCGGCGCCTG GGATTATATC
GAGAAAGGCT CGTCGGTCAA GGAGATAACC CTTTCCCTTG TCCGCGCCCT GGAATACCGG
AAACAGAAGA GGAACGGCAA AAGCGCAAGG AATGTGGTGG TCCTGAAGCG GGAGGATATC
GTCGGCAACA GCCCGAAGAC GAAGGTCTGC CTCGAACTGG TGGCCCAGGC TGCGGAATGC
GACGCAAACG TGCTCATCAC CGGCGAAACA GGATCGGGAA AGGAGCTCTT CGCCCGGGCG
GTACATGAGA ACAGCCGGAG AAACGGGAGA AACTTCGTGG TGGTCGATTG CGCGGCGCTC
CCGGAAACGC TCGTCGAGAG CCTCCTCTTC GGCCATGAAA AAGGCGCCTT CACCGGTGCG
GAACAGAGCC GGGAGGGGCT GGTTCTTCAG GCGAACGGAG GGACGCTCTT CCTCGACGAG
GTGGGAGAAC TCCCCCTCTC CATGCAGAAG GCGTTCCTGC GGGTTCTCCA GGAACACCGC
TTCCGGCCGG TCGGGGGTCA CCGTGAAATC GCCAGCGATT TCAGACTGGT GGCAGCGACC
AATCGGGACC TGGACCGCAT GGTACGTGAC GGCCGATTCA GGGAAGACCT CCTATTCCGC
CTCCGTTCCT TCGTCATCGA GTTGCCCCCC CTGCGGGAGC GGCCGGAAGA CATCAGGGAG
CTTGCCGGAT ATCATGTGGA CAAGCTGTGC GAACGTTACG GCCTTTCGGC CAAGGGATTC
TCACCCGAAT TCATGAAAAC GCTCGCCGCA TATCCGTGGC CCGGCAATGT GCGGGAGCTT
GTCAACAGCC TGGAACGAAC CATTGCCGCA GCCCGGCTGG AGCCGATTCT CTTCCCGAAA
CATCTGCCGG TGCAGATCCG CGTCCAGGTG GCGCAGGCCT CGGTGCGAAA CGGACCGGAC
GCCGACCGTC CGGAAGCTGC GCCTCCGGCG GGATTTCCGA AATTGCACGA TTTTAGGGAG
TCCGTCTATG CCCAGGCGGA AAAGCAATAT CTCCACGACC TGCTGGCACT CTCACAAGAA
AACATGAACG AGGCATGCCG GCTGTCCGGC CTGTCCCAGT CCCGCCTCTA CGCCCTTCTC
AAAAAACAGG AAATCTCCCA TCCCTAA
|
|---|
| Protein sequence | MAKILIIDDD DLMCQSLSLV AGRWGHEVTC THTLGAGLEK ASSQAFDVVF LDVRMPDGNG
LDMIPRIEAT TSSPEIIIMT GFGNPLGAEL AIKSGAWDYI EKGSSVKEIT LSLVRALEYR
KQKRNGKSAR NVVVLKREDI VGNSPKTKVC LELVAQAAEC DANVLITGET GSGKELFARA
VHENSRRNGR NFVVVDCAAL PETLVESLLF GHEKGAFTGA EQSREGLVLQ ANGGTLFLDE
VGELPLSMQK AFLRVLQEHR FRPVGGHREI ASDFRLVAAT NRDLDRMVRD GRFREDLLFR
LRSFVIELPP LRERPEDIRE LAGYHVDKLC ERYGLSAKGF SPEFMKTLAA YPWPGNVREL
VNSLERTIAA ARLEPILFPK HLPVQIRVQV AQASVRNGPD ADRPEAAPPA GFPKLHDFRE
SVYAQAEKQY LHDLLALSQE NMNEACRLSG LSQSRLYALL KKQEISHP
|
|---|
| |