| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2683 |
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| Symbol | |
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| ID | 5165447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 3116854 |
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| End bp | 3117723 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640550178 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001231430 |
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| Protein GI | 148264724 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.905975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA GAATAACCGG TCAAACAAAG GTGTTGGGAA TCATCGGTTC GCCAATTAAC
CATTCTCTTT CACCGCTGAT GCAAAATGCT GCCATTGAAG CCGTTGGACT GGACTTTGTC
TACGTTCCCT TTGCCGTCCC TGCCGACGGA TTGTGTGCGG CGGTCCAGGG ATTGCGAAAC
CTGGGGGTTG CCGGTTTCAA CGTTACCATT CCTTTTAAAA CGGCTATCAT ACCTTATCTT
GACAAACTTT CTCCCGAAGC GGAACTGATA GGCGCTGTCA ACACCGTTAA CCGGGAAGGT
GGATTTCTTG TCGGATACAA CACCGATGGC GCCGGCTTAC TCAAATCTCT TGCGGAAGAC
CTGGATTTTA CCCCCAAAGG TGCGCATGTG CTGATTTTGG GAGCAGGTGG CGCCGCAAGG
GGCGCCATTG CATCACTATG CAAAGCCGGG GTAGAATCGG TCATCATTGC CAATAGAACC
CGCAACAAGG GCGAGGAATT GCTTTCGTGC TTTAAAAGCG TTTTCCCGCA GGTGAAACTT
GCACTCTCTT CCCTGGATGT TCTTGGATCA TCGGATTTAC TCCATGGAAT CGACCTCATT
GTCAACACAA CCTCGGTGGG GATGGATAAT ACGTCATTTG ACGGCCTTGA CATGTCACTG
ATGAATCCTG CCACCCGCAT CTACGATATG GTTTATGCTC CGCTGGAGAC GCCCTTCCTG
TCGGCGGCAA AGGCAATGGG CTTGAAATCC GCCAACGGCA TAGGTATGCT TGCCGCACAA
GGTGAAATTG CTTTTGCTGT CTGGACCGGT TGCGCCCCTC CCTCAGGGTT GATGAAAAGC
TGCCTTTTGA CGGCGGTTAA AGCTAAGTAA
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| Protein sequence | MKSRITGQTK VLGIIGSPIN HSLSPLMQNA AIEAVGLDFV YVPFAVPADG LCAAVQGLRN
LGVAGFNVTI PFKTAIIPYL DKLSPEAELI GAVNTVNREG GFLVGYNTDG AGLLKSLAED
LDFTPKGAHV LILGAGGAAR GAIASLCKAG VESVIIANRT RNKGEELLSC FKSVFPQVKL
ALSSLDVLGS SDLLHGIDLI VNTTSVGMDN TSFDGLDMSL MNPATRIYDM VYAPLETPFL
SAAKAMGLKS ANGIGMLAAQ GEIAFAVWTG CAPPSGLMKS CLLTAVKAK
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