Gene Gura_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_2583 
Symbol 
ID5163641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2988334 
End bp2990523 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content56% 
IMG OID640550080 
ProductTPR repeat-containing protein 
Protein accessionYP_001231334 
Protein GI148264628 
COG category[N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF
[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTC GTTCGGTTAA AGTGCTCTGC TTGTTGCTGC TGCTCACGCA GCTTTTTGCC 
TGCAGCGGTC CGGAAGAAAA AAAGAAGAAA TTCTTCGATA AGGGGAAGGC TCTTTATGAA
AAGGGCGACT ATGTGAAGGC CAATCTTGAA TTCCGCAATG CCGTCCAGAT TGACCCGAAA
TTTGCGGATG CCTACTACAT GCTTGGTTTG GTTGAACTGA AGCGGAACAA CCTTAAGGGT
GCTTATGGCG GTTTCAACAA GGCCATCGAG CTCAATCCCC ATAATCTGGA CGCCCAGTAC
CAGATGGGAA AACTGTTCCT GGCGGTCAGG GAGGCGGACA AGGCGATGGA AAAGGCGGAG
TTGATACTAA AGGAAAATCC CCGCCACGAG GATGGTCAAC TATTGAAGGG GGCTGCGCTG
GTAGCCGGGA AGGAACTGGA CAAAGCCCGG CTCTACCTGG AGGAGGTTAT CGGCGGGGGG
GTGCGCAAGC CCGACGCATT TTTACTGCTT GCCTCAATTG CCCGATTGAA AGGGGATATG
TCCGGAACTG AAACGGCACT GCGGAAAGGG CTGGAAGCCA ACGGCGCATC TGTTGAGTTG
AATCTTGCCC TCGCCGAGCT GTATGCCGGG ACGAAGCGGT CCGGCGAGGC GGAAACCCTG
CTCCGGAAGG TTATCGTCCT TGAGCCGAAA AATATCAGCC ACAGCCTGAA CCTGGCAGGT
CTCTACTGGG CTTCCGGTAA TCGGGAGAAG GGGGAGTCGC TGCTGAAAAG TCTTGTAGCC
GGTGAGCCGA AGGATGAGGA GCGGCGGTTG CAGGTGGCTG CATTCTATCT GGGCAGAAAC
CTTCCCGATG ATGCCGAGCG TCTGCTGAAA GACGGCGTTG CGCAGATCGG AAAAAGCTTC
AAACTCCGCT TTGCGCTGAG TGATCTTTAT GCGGGCAGCG ACAGGGCGGA CCAGGCCATT
GTCTGTTTGA AGGAGTGTCT GACCCTGGAA AAGGATGCTA AAAATCCGGA GGTTATCCAG
GCAAAAAACG CCCTGGCCAA GATATACCTG GCCGGTCAGG ATCTGGTTGA AGCCGGGAAA
TATGTCGATG AGGTGATTAA GGCCAGTCCG AAGAACGTGG ACGGGCATTT CCTCAAAGGG
AGCATTGCCC TTTTGAAGAA TGACGGGGTT AATGCCGTTG CGGAATTTCG CACCGTTGTC
GCAGAGCAGC CCCAGTCCAT TCAGGGATAC CTGCGCCTGG CGGAGGCCCA TGCCCTGAAC
CGGGAGATGA ACTTGATGAA CGACACCCTG CAGAATGCGT TGAAGGTCGA TCCGGAATCA
AGCGATGTGC AGCGCGCCAT GGCCCGCAGT TACGCCATGC AAAAGGATTT CAGGAAGGCG
GAGGAGCAAC TGCGCAAGCT TGTCCGGAAA TACCCCGGCG ACATGGAAGC CAGAAGCGAC
CTCGGCGACG TATTTGTGGC AGCTCGTGAT TTCGGGCGAG CCGAATCGGA ATATGCCGAC
CTCAAGCGCA AAGTTCCCCA GATACCCCTT GCCTATGTGA AGCTGGGTGA ACTTTACATG
CTGGAAGGGA AATGGGCGAG GGGGGCAGCA GAGCTGGAAA AGGCCTTGCA GATCAACCCC
CGGGCAACCA GTTTCCTCTC TTCCCTGATG CAAGCCTATC TGCGCCTGAA CAAAGGGGAC
GCGGCCGTTG CGCTGCTCGA TGCCCGGATA CGCTCGAATC CGAAAGATGC TGTTGCCTAT
ACCTTGCTGG GACAACTCTA CGGTGCGCAG AAAAATCTGC CGAAGGCCGA TCAGGCATAC
AGCAAGGCGT TGGAGTTGAA GCCGGACCTA TGGACGGCCG CCAATGATCT GTCATTCCTC
CTCTGCGAAT ACGGCACGCC AAAGGACCTG GACAGGGCGC TCAGTCTGGC GCAAAAGGCT
CAGGCGATAC GCCCGGATGA TGCGACGGTG CTGGATACCC TCGGCTGGAT ATACTACAGG
AAAGGGGATA ACCGGAAAGC TGAGGAACAT CTCCGCAAAG CCCTGGCCAA GGGGAAAGAC
AATCCGGTGA TGAATTATCA TCTGGGGATG GTATCCCAAA AATCAGGCAA ACGCGACCTG
GCAAAGGAGT CCCTGGACAG GGCGCTGGCA GGTAAGGAAT GGTTTCCGGG CCGGGACGAG
GCAGTGAAAA CTTTGGCGCT GGTCAGGTAA
 
Protein sequence
MKLRSVKVLC LLLLLTQLFA CSGPEEKKKK FFDKGKALYE KGDYVKANLE FRNAVQIDPK 
FADAYYMLGL VELKRNNLKG AYGGFNKAIE LNPHNLDAQY QMGKLFLAVR EADKAMEKAE
LILKENPRHE DGQLLKGAAL VAGKELDKAR LYLEEVIGGG VRKPDAFLLL ASIARLKGDM
SGTETALRKG LEANGASVEL NLALAELYAG TKRSGEAETL LRKVIVLEPK NISHSLNLAG
LYWASGNREK GESLLKSLVA GEPKDEERRL QVAAFYLGRN LPDDAERLLK DGVAQIGKSF
KLRFALSDLY AGSDRADQAI VCLKECLTLE KDAKNPEVIQ AKNALAKIYL AGQDLVEAGK
YVDEVIKASP KNVDGHFLKG SIALLKNDGV NAVAEFRTVV AEQPQSIQGY LRLAEAHALN
REMNLMNDTL QNALKVDPES SDVQRAMARS YAMQKDFRKA EEQLRKLVRK YPGDMEARSD
LGDVFVAARD FGRAESEYAD LKRKVPQIPL AYVKLGELYM LEGKWARGAA ELEKALQINP
RATSFLSSLM QAYLRLNKGD AAVALLDARI RSNPKDAVAY TLLGQLYGAQ KNLPKADQAY
SKALELKPDL WTAANDLSFL LCEYGTPKDL DRALSLAQKA QAIRPDDATV LDTLGWIYYR
KGDNRKAEEH LRKALAKGKD NPVMNYHLGM VSQKSGKRDL AKESLDRALA GKEWFPGRDE
AVKTLALVR