Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_2309 |
Symbol | ksgA |
ID | 5165506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 2671044 |
End bp | 2671871 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640549805 |
Product | dimethyladenosine transferase |
Protein accession | YP_001231061 |
Protein GI | 148264355 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000265248 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA TTCGCGCTAA AAAATCAATG GGGCAAAATT TCCTCGTTGA CAGAAATGTC CTTACTCGGA TCGTTGACGC TGTAAATATT AGTGCTGAAG ACAGGATTCT GGAAGTAGGA CCGGGAAAGG GTGCGCTGAC CGCTTTATTG GTGGAGCGCG CTGCACAGGT CTTGGCCGTT GAGTTGGATC GACAGCTTGT TCCATTTCTT GCCAGGGAAT TTGCCCCGCA AAAAAATGTG GAGTTCGTTC AGGGAGATAT CCTTAAGGTG AACCTTTCCG AACTGCTCAT GGACCGCTGG AGTGGGGCAT GGAAGGTTGC TGCGAATCTG CCATATAATA TTTCCAGTCA GGTGCTGTTC AAATTTCTTG ATAACCCGAA GCTCTTTTCG CTGCTCATAC TCATGTTGCA GAAAGAGGTT GGCGACAGGC TCATTGCCGC ACCCGGCTGC AAAGATTACG GGATACTTTC TGTTTTTTGC CGTCTTCATT TTGATATCAG CCGCGTATTG ATCGTTAAGC CGGGCTCTTT TACCCCTGTT CCCAAGGTAG ATTCAGTCGT GCTGAAATTT GTTCCCTTGC CGGCTCCGAG GGTTGATGTG GAGGATGAGA GCTTTTTTCG CAAAGTCGTT AAAGCAGCTT TTAGCCAGCG TCGTAAGACA TTATGGAACT GTCTCAAATC GTCAGAACTG GGTGTGGATG GTGATGTCCT CCTCTCATTA CTTACCAAGT GTGGAATAGA CGGGAGCAGG AGAGGAGAGA CCCTTTCCCT GGATGAATTT GCCGTGTTGA CGCGGGCGAT TCTCGGCTTA CGGAAGTTAA ATACATAG
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Protein sequence | MEKIRAKKSM GQNFLVDRNV LTRIVDAVNI SAEDRILEVG PGKGALTALL VERAAQVLAV ELDRQLVPFL AREFAPQKNV EFVQGDILKV NLSELLMDRW SGAWKVAANL PYNISSQVLF KFLDNPKLFS LLILMLQKEV GDRLIAAPGC KDYGILSVFC RLHFDISRVL IVKPGSFTPV PKVDSVVLKF VPLPAPRVDV EDESFFRKVV KAAFSQRRKT LWNCLKSSEL GVDGDVLLSL LTKCGIDGSR RGETLSLDEF AVLTRAILGL RKLNT
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