| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2238 |
|---|
| Symbol | |
|---|
| ID | 5164572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2598024 |
|---|
| End bp | 2598767 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640549734 |
|---|
| Product | thiamine pyrophosphate binding domain-containing protein |
|---|
| Protein accession | YP_001230994 |
|---|
| Protein GI | 148264288 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000276409 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGG TTTTCAAAAA GCCGGTAAGT CTGAAGGACG TGCAGACCCA TTTCTGCCCG
GGTTGTCACC ATGGCACGAT TCACCGTCTC GTTGCCGAGG CGATGGATGA ATTTGGCGTG
CAGAAACGGA CCATCGGCGT TGCGTCGGTC GGGTGCTCGG TCTTTCTCTA CGGCTATTTC
GATGTCGATG TTGTGGAGGC GCCCCATGGC CGCGCTGCAG CGGTGGCGAC CGGTGTGAAA
CGGGCGAAGC CGGAGAGCTT CGTCTTTACC TATCAAGGTG ACGGGGACCT TGCTGCCATC
GGCACTGCTG AAATTATCCA TGCTGCTAAC CGTGGCGAAG ATATTACCGT TATTTTCGTT
AACAACACGA CCTATGGAAT GACTGGTGGG CAGATGGCGC CGACCACCCT GGTCGGTCAG
AAAACTTCAA CCTCCCCCTA CGGCAGAAAT CAGTCAAAGG ACGGGGCACC CATCAGGATG
GCCGAACTTC TGTCGCAACT GGAAGGTGTG GCATTCTCTG CGCGGGTGGC GGTTAATTCG
CCCAAGAACC TGATGGACGC CAAAAAGCAG ATCAAAAAAG CCTTTCAGTA TCAGGTGGAA
GGAAAAGGAT TTTCCTTTAT CGAGGCGCTT TCCTCTTGCC CGACCAACTG GGGGCTGAAC
CCGCTCATGG CAAACTCACG GGTCGGCACG GAAATGTGCG ACTATTTCAG GTTGGGAGTG
TTCAAGAATA CGGAGAATTT GTAG
|
|---|
| Protein sequence | MQQVFKKPVS LKDVQTHFCP GCHHGTIHRL VAEAMDEFGV QKRTIGVASV GCSVFLYGYF
DVDVVEAPHG RAAAVATGVK RAKPESFVFT YQGDGDLAAI GTAEIIHAAN RGEDITVIFV
NNTTYGMTGG QMAPTTLVGQ KTSTSPYGRN QSKDGAPIRM AELLSQLEGV AFSARVAVNS
PKNLMDAKKQ IKKAFQYQVE GKGFSFIEAL SSCPTNWGLN PLMANSRVGT EMCDYFRLGV
FKNTENL
|
|---|
| |