| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2183 |
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| Symbol | |
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| ID | 5164298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 2542551 |
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| End bp | 2543657 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640549680 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001230943 |
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| Protein GI | 148264237 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000221652 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATT TTCACGAAAA AATGATGAAA CGCGCCATTG TCCTGGCGAA ACGGGGGATT
GGCAGAACTG CGCCGAACCC GACGGTAGGG TGCGTGATTG TTAAAGACGG CGCGGTTGTG
GGGGAGGGGT GGCATAAAAA GGCCGGTACC CCCCATGCCG AGGTCCATGC GTTGCGACAA
GCCGGCGAAA TGGCCCGGGG CGCCGATGTC TATGTCACCC TTGAACCGTG CGCCCACTTC
GGAAAGACTC CGCCTTGCGC GGATGCACTC ATAGCGGCGA AGGTGTGCAG GGTCCATATC
GGCATGGTTG ATCCCAATCC CAGGGTATGC GGCGAGGGGA TCTCGATGCT CCGCTCGGCC
GGCATTGAGG TCGTCGTTTC CGTCCTTGAG GATAACTGCC GCTCGTTGAA CGAGCCTTTC
ATCAAGCATA TGACCACCGG CCTTCCTTTT GTCATCCTGA AAAGCGCCAT GACGCTGGAC
GGGAAAACAG CCACAGCCGG TAAAGACTCC AAATGGATAA CCAGTGATAA ATCAAGGCAA
TATGTTCACA AACTTCGAGC AAAGCTTGAT GCGATAATGG TGGGGGTCGG CACCGTCATG
GCAGATGACC CGCTTCTTAC CTCCAGAATT CCCGCCGGCA GGGACCCGCT GCGCGTTATT
GTCGACTCCA CCTTGCGAAT TCCACTGTCA TCGCAGGTTC TTCATGTCGA CTCCCCTGCT
AAAACGGTTA TTGCCACGAT TTCCGACGAT GAAGCGCAGG CTGCCCGGAT AACGGCTTCT
GGTGCCGACG TCCTGCGCTG TCGGCAGAAG AATGGCCGCG TTGATCTCCA CGATTTGTTC
GTCAAGCTCG GCGGACTGGG GGTGCAGTCG CTTCTCCTCG AAGGGGGAGG AGCGCTTGCC
GGTGAAGCGC TGCGTTGCGG GTTGATCGAC AAGTGCATGT TTTTCTATGC GCCGAAATTG
GTCGGCGGCG AAGGTTTAGG CCCATTCTCC GGCAAAGGGG TAGAGCTTAT GGCCGATGCA
ATAACGCTGA AAAACATTTC CATTACTAAG ATAGGAAGCG ATATCCTCGT CCAGGGGTAT
CCGGAGAACG CATGTTTACA GGTCTGA
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| Protein sequence | MEHFHEKMMK RAIVLAKRGI GRTAPNPTVG CVIVKDGAVV GEGWHKKAGT PHAEVHALRQ
AGEMARGADV YVTLEPCAHF GKTPPCADAL IAAKVCRVHI GMVDPNPRVC GEGISMLRSA
GIEVVVSVLE DNCRSLNEPF IKHMTTGLPF VILKSAMTLD GKTATAGKDS KWITSDKSRQ
YVHKLRAKLD AIMVGVGTVM ADDPLLTSRI PAGRDPLRVI VDSTLRIPLS SQVLHVDSPA
KTVIATISDD EAQAARITAS GADVLRCRQK NGRVDLHDLF VKLGGLGVQS LLLEGGGALA
GEALRCGLID KCMFFYAPKL VGGEGLGPFS GKGVELMADA ITLKNISITK IGSDILVQGY
PENACLQV
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