| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2048 |
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| Symbol | |
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| ID | 5163087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 2396175 |
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| End bp | 2397896 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640549543 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001230811 |
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| Protein GI | 148264105 |
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| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.732994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AGTATTGTGT TGTCAACCTC TGGTTCTTTG TGGTTCTCTC AGGATGCGCG
ACCGGCCATG TAGCCGAGCC GCCTCTTCTT CAGGCTCAAG CCCTCCATCC CGACGTTAAT
ATCGCTGAAT CACGCTCCAT GTATATCTAT TCGCTCTCCC GTATCCATGT TCTGGAAGGT
GATTTCGATG GGGCTTTATC CCTCCTCCAG GCGGCGGTTG AGGCAGATCC CAAATCCGCT
TTTCTTCGCA AATCCATTGC TCAGGTCTAT TTACAGATGA ACAGGTTCCA GGACGCGCTG
GAATCTTGTC AAACCGCCAT CAAACTTGAT CCCGGCTTTG TCGAGGCACA GATCCTGGCA
GGAAATATTC TGGTCGGTCT GCAGCGGGAT AAAGAGGCCA TTCCTTACTA CAAAAAGGCC
CTTGAAATTG ACCCGTCCAA GGAAGACATC TACCTCCACC TGGCCATCGC CTACGTGAAG
GGGTTTGAAT ACGAGGAGGC TGTCAACACC CTTAAGGTGC TTCTCAAGGT CAATCCCGAT
TCCGCCATCG GTTATTACTA TCTGGGGAAG ACTTACGATC AGATGAAGCT TTCCAAGGAT
GCCGCCAACT ACTATAAAAA GGCGGTGGAG CTGAAGCCGG ATTTTGAGCA GGCTATCATT
GATCTGGGGA TTTCCCAGGA AATGCAGGGG CTCGCCGGTG AGGCAATTAA TACCTACAAT
GAATTGTTGC GGATCAATCC GGTTAATTAC AATGTCATTC AACATCTGGT TCAGCTGTAT
ATCCAGCAGA AGCGCCTTAA TGACGCCCTT ACGTTGTTGA AAAATATGGC CGACAGCGGT
ATCGGCGGAC AGGAAACACA CCGTAAGATC GGCCTCATTT ATCTGGAGAT GGAGCGTTAC
GACGACGCAA TCAAGGAATT TACCGAGATA CTCGGGCAGG AGCCGGACGC TCAGCAGGTT
CGATATTATC TGGCATCCAC TTATGAGGAG ATGGAAGATT TCGACCGTGC CATCGAAGAA
TTCAAGAAGA TCCCCCCGTC ATCAGCCCAT TATTTTGATG CTTTGGGACA TCTCGGCTTC
CTTTATAAGG AAAACGGAGA GCCGGAGAAG GGGATTGCAC TTCTTAAGGA AGCAATCACC
AACCAGCCGA ATCGAATCGA ACTTTATCTG AATCTTGCCG GACTCTATGA ATCGATGGAT
CAATTTGCCG AGGGGCTCCG GGTGTTGACG GATGTGGAAG GGAATTTCCC CAATGATCCT
CGGCTGAGCT TCCGCATGGG CGTTCTTTAT GACAAGATGG GTAACAAGGA CGAATCTATT
GCCCGGATGA AAAAGGTCAT TGCCCTGGCG CCGAACGATG CGCAGGCATT GAACTATCTC
GGCTATACCT ACGCAGAGCT TGGCGTCAAT CTGGATGAGG CGTTGCAGTA TCTGAACAAG
GCCGTTTTGC TCCGCCCGGA TGACGGCTTC ATTCTGGACA GCCTCGGTTG GGCCTATTAC
AAAATGAAGC GCTACGACCA GGCGGTGTTC CATCTGGAAC GGGCCGTCCA GCTGGTTGAC
GAGGACGCCA CCATAATTGG TCACCTGGCC GATGCATATT TTGCCAACAG GGAATACCGC
AAGGCGCTTA CACGTTATCG CCGCGTCCTG CAGCTGGAGC CTGAGCGCAA GGACATCGCC
GAGAAGATAA AGAAGATCAT GGCGGAGACC GGTGAAAAAT GA
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| Protein sequence | MKKKYCVVNL WFFVVLSGCA TGHVAEPPLL QAQALHPDVN IAESRSMYIY SLSRIHVLEG
DFDGALSLLQ AAVEADPKSA FLRKSIAQVY LQMNRFQDAL ESCQTAIKLD PGFVEAQILA
GNILVGLQRD KEAIPYYKKA LEIDPSKEDI YLHLAIAYVK GFEYEEAVNT LKVLLKVNPD
SAIGYYYLGK TYDQMKLSKD AANYYKKAVE LKPDFEQAII DLGISQEMQG LAGEAINTYN
ELLRINPVNY NVIQHLVQLY IQQKRLNDAL TLLKNMADSG IGGQETHRKI GLIYLEMERY
DDAIKEFTEI LGQEPDAQQV RYYLASTYEE MEDFDRAIEE FKKIPPSSAH YFDALGHLGF
LYKENGEPEK GIALLKEAIT NQPNRIELYL NLAGLYESMD QFAEGLRVLT DVEGNFPNDP
RLSFRMGVLY DKMGNKDESI ARMKKVIALA PNDAQALNYL GYTYAELGVN LDEALQYLNK
AVLLRPDDGF ILDSLGWAYY KMKRYDQAVF HLERAVQLVD EDATIIGHLA DAYFANREYR
KALTRYRRVL QLEPERKDIA EKIKKIMAET GEK
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