| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1998 |
|---|
| Symbol | |
|---|
| ID | 5166952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 2316872 |
|---|
| End bp | 2317390 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640549492 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_001230761 |
|---|
| Protein GI | 148264055 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000269346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT ATACCGTTGT AACTTTACTT GGTCTGATTT TCTCTTTTGC AGCAGTTTTG
TCTGCCCGGG CTGATTTCAA CACCGGCCTC AGGGCTTATC AGCAGAAGGA CTATGCAACG
GCGCTGCGTG AATTCAAGGC CGATGGAGGC GCCCAGTCCA GCTACGCCCT CAGCATCATC
TATTACAAGG GTGAGGGTGT GGAGCCGAAC CGGAAGGAAT CGGTAAAATG GCTGCGCAAG
TCCGCTGAGC AGGGGTTTGT CCGGGCGCAA TACAATCTTG CCATGATGTA CGACAAGGGG
GACGGCGTTA ACAAGGACCA GACCGAAGCC GCCAAGTGGT ATCGGAAGGC GGCAGAAAAA
GGGCATGCCC AGTCCCAGTT CAATATAGGC CTCATGTATA CCAACGGTGA AGGGGTAGGC
AAAGACAAAA AAGAGGCGGT AAAATGGTTA CGCAAAGCCG CAAAGCAAGG GCATCCAAAC
GCGCAAAAAC TTTTGAAGGT AATGGGTGAA AAGTATTGA
|
|---|
| Protein sequence | MKRYTVVTLL GLIFSFAAVL SARADFNTGL RAYQQKDYAT ALREFKADGG AQSSYALSII
YYKGEGVEPN RKESVKWLRK SAEQGFVRAQ YNLAMMYDKG DGVNKDQTEA AKWYRKAAEK
GHAQSQFNIG LMYTNGEGVG KDKKEAVKWL RKAAKQGHPN AQKLLKVMGE KY
|
|---|
| |