Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1946 |
Symbol | |
ID | 5165909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 2254748 |
End bp | 2256430 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640549440 |
Product | nickel-dependent hydrogenase, large subunit |
Protein accession | YP_001230709 |
Protein GI | 148264003 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACAA GAATTACCCT GGATCCCATA ACCCGTATCG AAGGGCACCT GCGGATCGAT GTTGAAGTTA ACGGCGGTAA AGTTTCCAAT GCCTGGTCTT CTGCCCAGAT GTGGCGGGGG ATCGAAGTGA TACTGAAGGG GCGTCCACCG GAAGACGCCT GGTCATTCGC CCAGCGCTTC TGCGGCGTCT GTACCACGGT CCATGCCATC TCTTCCATCC GTTCCGTGGA ACACGCGCTG AAAGTGGAAG TGCCGCTCAA CGCACAGTAC ATCCGCAATA TCATGATCGC CCAGCACTCG GTGCAGGATC ACATCGTTCA TTTCTACCAC CTGTCGGCCC TTGACTGGGT GGATATCGTC TCCGCGCTGA AGGCCGATCC GAAAAAGACC GCCCAGGTCG CCCAGAGTAT CTCCGATTGG CCCGGCAACA GCGAGAAGGA ATTCAAGGCA GTGCAGGACA AGCTGAAAAG CTTCGTCGCC GGCGGCAAAC TCGGCATCTT CGCTTCCGGC TACTGGGGGC ATCCGGCCAT GAAACTCCCC CCCGAGGTCA ATCTGCTGGC CGTTGCCCAT TACCTGAAGG CACTCGATTA TCAGCGCAAG GCAGCACAGG CTGTGGCGAT CCTCGGCGGG AAAAACCCCC ATGTCCAGAA CCTGGTGGTC GGCGGCGTTG CCACGGCAAT CAACATGGAA AACCTCGCCA CCCTCAACAT GGAAAGGCTC GTCTATCTCA AAACCCTGAT GGAGGAAACC AGGGATTTCG TGCAGAAGGT CTATTACCCC GACATGCTGG CCATAGCCTC TGCTTACAAG GATTGGTTCA AGTACGGGGC AGGGGTTACC AACTACCTGG CCGTGCCCGA GTTCCCGGAA GACACCCGAA ACACCAAGTT CGCACTTAAC GGCGGCATCA TCACCGCCGG CAACCTGGCC GCCATGCGAC CGGTCAAGGA CCATCACGAC GAGTACCTGA TCAACAACGT CAAGGAATCG GTCGCCCATG CCTGGTACGA AGGCACCTCC AGCCTCCATC CATGGGAAGG GGAGACCAAG CCGAATTACA CCGACTTCAA GGAAAACGAA AAATACTCCT GGTGCAAGGC TCCCCGTCTT GACGGTAAAC CGGTACAGGT AGGTCCTCCG GCACAGATCT TCGCTGCCTA TGCTGCCGGT AATCCCAAGG TGAAGAAACT GGTGGACAGC GCCAATTCAA CCATCGGTAT CGGCATGAAA GACTACCATT CCACCATGGG CAGGCTTTTG GCCCGCGCCC AGAGGGCTCA CCTCATGGCG GACATTTCCC TGGACAACCT GGACAAGCTG ATCGCCAACA TCGCTTCCGG CGACAAGGTC TATGCAAACC ATACCGAAAT ACCCAAGGGA GAATACCGTG GGGTCGGTTT CCACGAGGCG CCGCGCGGCA CCCTGTCCCA TTGGATCGTT ATCAAGAACC GGAAAATAGA GAATTATCAG GCGGTAGTGC CTTCCACCTG GAACGCATCC CCGCGCGACG AAAAGGGCGC CTTGGGCCCT TATGAGGCGT CGCTGGTTGG GAACCCGGTT GCCCAGGCAG ACAAACCGCT CGAAGTGCTG CGGACCGTTC ATTCCTTCGA TCCCTGTATT GCCTGCGCCG TGCATGCAAT CGACCCGGAA GGGAAGGAAA TCACCAAGGT GAAGGTGCTT TAG
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Protein sequence | MSTRITLDPI TRIEGHLRID VEVNGGKVSN AWSSAQMWRG IEVILKGRPP EDAWSFAQRF CGVCTTVHAI SSIRSVEHAL KVEVPLNAQY IRNIMIAQHS VQDHIVHFYH LSALDWVDIV SALKADPKKT AQVAQSISDW PGNSEKEFKA VQDKLKSFVA GGKLGIFASG YWGHPAMKLP PEVNLLAVAH YLKALDYQRK AAQAVAILGG KNPHVQNLVV GGVATAINME NLATLNMERL VYLKTLMEET RDFVQKVYYP DMLAIASAYK DWFKYGAGVT NYLAVPEFPE DTRNTKFALN GGIITAGNLA AMRPVKDHHD EYLINNVKES VAHAWYEGTS SLHPWEGETK PNYTDFKENE KYSWCKAPRL DGKPVQVGPP AQIFAAYAAG NPKVKKLVDS ANSTIGIGMK DYHSTMGRLL ARAQRAHLMA DISLDNLDKL IANIASGDKV YANHTEIPKG EYRGVGFHEA PRGTLSHWIV IKNRKIENYQ AVVPSTWNAS PRDEKGALGP YEASLVGNPV AQADKPLEVL RTVHSFDPCI ACAVHAIDPE GKEITKVKVL
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