Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1908 |
Symbol | dut |
ID | 5165351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 2212642 |
End bp | 2213133 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640549399 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_001230671 |
Protein GI | 148263965 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.15849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTTATC AGACATATCA CTACAATAAC AACACTATTC CCATGCACAC TATTAATGTA AAGATAAAAC GTATTCGTCA TGACGGAACA AATCCGCTGC CTCAATATAT GACCCTTCAT GCGGCCGGTA TGGATCTTTC TGCCTGTTTG AGTGAAGACC TGGTTTTGAA GCCGGGAGCC AGGACACTTG TGCCGACAGG TATCGCCATT GAACTTCCCG AAGGATATGA GGCCCAGATA AGACCGCGAA GCGGCCTTGC TCTGAAGCAT GGCGTTACGC TCGTCAATTC TCCAGGTACC ATTGATGCTG ATTATCGGGG TGAAATAGGA GTGATTATCA TAAATCATGG GGAAGAGCCA TTTATCATAA AAAATCAGGA ACGGATTGCC CAGATGGTTT TTGCCCCCTT TATCAGGGCG ATTTTTGAAG AAGCTGCCGA ACTGGGAGAT ACTCAACGCG GAGCAGGCGG TTTTGGTCAT ACGGGCAGGT AA
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Protein sequence | MLYQTYHYNN NTIPMHTINV KIKRIRHDGT NPLPQYMTLH AAGMDLSACL SEDLVLKPGA RTLVPTGIAI ELPEGYEAQI RPRSGLALKH GVTLVNSPGT IDADYRGEIG VIIINHGEEP FIIKNQERIA QMVFAPFIRA IFEEAAELGD TQRGAGGFGH TGR
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