Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1886 |
Symbol | |
ID | 5165162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 2188167 |
End bp | 2189555 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640549377 |
Product | diguanylate cyclase |
Protein accession | YP_001230649 |
Protein GI | 148263943 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAGGA TTCTTGTAGT TGAAGATGAT AGTTTTTTCA GGGAGGTATT TGCCGATCTC CTCATCGAAG ACGGTTTCCA TGTCGATGTG GCCGCTTCAG GTGAACAGGC CCTGGTAATG GTACAAAACC GTGAATACCA GCTTGTGGTG ACCGATCTTG TAATGCCGGA TATCACCGGG CTTGACATTC TATCCAAGGT CAAGCAGCTC GATCCCACCA TTGATGTCAT TATGGTTACC GGCCATGCCA ACATGGAAAC GGCGATATTC GCCTTGAAAA ACGGCGCCAG GGATTATCTG GTCAAGCCGA TAAACCACGA CGAATTCAAG CATGCAGTCG CCTTGTGTTT CGAGCAGCGA CGGCTTCTCG ACGAAAATCA GGAATTGAAG GGGCTGATAA ATCTCTATCA TGTAAGTCAG ACCATAGCGA ACTGTCTTGA CCTTGAGCGT ATTCATACGC TGCTCGTCGA TTCGTTGGCC AAGGAATTCG CCGTAAGCCG GGGGCTTGGA TACTTTCTGG ACGGTGCCGA CAACCTGGAG TTGAAAGCGC TTAAAGGGGT AAGCGAGGCC AGTGCCGGAC GGCTTGGGGA GTTGATCCTA TCCAGATACA ACGTGCAGGG GGAAGATTCC CGCAGTTTTG TTCTGCTCCA TGACTTCATG CAGCCTGATG CGGATTTCGG CTTGGGGACT GACGGAGACA TGAAAGAGGC GATGCTCTTT TTTGTCCGGT CCAGAACAGT TCTCCAGGGT ATTGTGATTC TTTTCAGTGA ACCGGGGACA AGTTTTCCGG CGGATATCCA GTTCAAGAAT ATTAATTTCC TGCTCGATCA GTCTTCCTTG GCGCTGGAAA ATGCGGTTCG CTACAACAAT GCCAAGAATC TCCTCTATAT CGACGAACTT ACCGGCCTTT TCAATTACCG CTATCTGGAC GTTGCCCTTG AACGCGAGAT CAGGAGGGCC GAGCGGTACG GCTCCCACAT ATCGGTTATC TTCCTCGATA TCGACCTGTT CAAGCGGGTT AATGACATGT ATGGACACCT CGTCGGCAGC AGGGCGCTGA ACGAAGTGGG GATACTGCTG AAAAAGTCGG TGCGCGACGT GGACACGGTT ATTCGATACG GGGGAGATGA GTACACCATT ATCCTCATCG AAACCGGGAT CGATGGGGCT GCAGCCGTCG CAGAACGTAT CCGCAGATCG ATTGAAGCGC ACGGTTTTAT GGCGGCAGAC GGCCTGAACC TCAAGCTGAC CGCCAGCCTG GGATACGCCT GTTATCCTGA AGACGCAAAA ACGAAGACGG AACTCCTGGA GCTGGCTGAT CAGGCCATGT ATCGCGGTAA GGCCGACGGC AAAAACAGGG TTTTTTATGT TTCCGCGAAA AATAACTAA
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Protein sequence | MERILVVEDD SFFREVFADL LIEDGFHVDV AASGEQALVM VQNREYQLVV TDLVMPDITG LDILSKVKQL DPTIDVIMVT GHANMETAIF ALKNGARDYL VKPINHDEFK HAVALCFEQR RLLDENQELK GLINLYHVSQ TIANCLDLER IHTLLVDSLA KEFAVSRGLG YFLDGADNLE LKALKGVSEA SAGRLGELIL SRYNVQGEDS RSFVLLHDFM QPDADFGLGT DGDMKEAMLF FVRSRTVLQG IVILFSEPGT SFPADIQFKN INFLLDQSSL ALENAVRYNN AKNLLYIDEL TGLFNYRYLD VALEREIRRA ERYGSHISVI FLDIDLFKRV NDMYGHLVGS RALNEVGILL KKSVRDVDTV IRYGGDEYTI ILIETGIDGA AAVAERIRRS IEAHGFMAAD GLNLKLTASL GYACYPEDAK TKTELLELAD QAMYRGKADG KNRVFYVSAK NN
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