Gene Gura_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_1885 
Symbol 
ID5164876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2185657 
End bp2188050 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content55% 
IMG OID640549376 
ProductDNA internalization-related competence protein ComEC/Rec2 
Protein accessionYP_001230648 
Protein GI148263942 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.372915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGAGA GACCGCTATT CATTCCCCTT GCTTCGATAA TAGCGGGTCT CTCCATTGCC 
GGGTTTTATT CGTTTTTTTT GCCCGAAAAC CTACTTCTGC CCCTGTTGGC CGTATCGTTC
TTTACGATTT TCGTTCGGAA TCGACTCTCC TTCCTTATTG CCATTTCTCT GCTTTTTTTC
TGCTGGGGTA ACCTCGCGGT AAAGCCTTTA ATTCAACCCC GTCTCGAAAT CAACCACATT
GCGAACTTTG TCGGCGATAA AACGGTGACC ATTGAAGGGG TTATCGACGG TCGTCCCGAG
GCGACTGAAC TGGGAAGCAG GCTTTATCTG CACGTTGAGC GCCTCTTTGC CGGGGAGAGG
CATGCTGCTG TAACGGGCCG ACTTTTGCTG CATGTCGGAG AAGCTCGGGT TACGTTTCTG
ACCGGCGACC GGGTAAGGTT CGTCACGCAT CTGCACAAAC CGAGGAATTA CGGTTTGCCC
GGTGAATTCG ACTATGCGCG ATTCCTGGCA TTCAAAGAGG TTTTTGTAAC TGCTTTTGTG
AAAGGGGCGG ATGATGTGAT TCTTATCCGG GAGGGGGTCG ATAATCGGCC GCAAAGGCGT
ATCGACCATC TCGCCTCAGG GATGGGACGG TTTATCGGCA GTGCGATCCC GGGAGTGGAA
GGTTCGATTC TTCGGGCGCT CCTCATCGGG GAGAGGGGTT ACGTTCCGCG TAAGCTTGAA
GATGACTATT CGCGGACCGG TGTCAATCAT ATCCTCTCGA TTTCCGGATT CCATGTGGGC
ATCATCGCCC TGTTCGTTTT CCAGCTTCTG CTGGCGGCCG GCCGCAGCTC GGAATTTCTC
ACCCTTCATT TTAACCTGCG CAAATGCATT CTTGTCATCA CCCTGCCCGT TATTGTCTTC
TATCTCCTTC TTTCCGGAAC CGCACCGGCA ACTGCCCGCT CGGTGATAAT GATCGCCGCA
TACGTTGTTG CCTTGATTCT CGAACGGGAG GTCGAGCCGG TTAGCAGTCT GCTTTTGGCC
GCTATGGTTA TTCTCGCACT CTCGCCCGCG GCGCTGTTCG ATATTTCATT CCAGTTGTCG
TTCCTTGCCC TATGGGGAAT TCTGATCCTC ACGCCGCTTT TCATGGTCCC TTTTACCGCG
GTGTCCAATG CATTGCTGCG CAAGCTGCTG CTCTTCTTTA TGGCCTCTTT TGCCGCAACC
ATTGCCACTC TCTTCCCCGT TGCGTATTAT TTTCACAGGG TTTCCTTTAC CGGCCTTATC
AGCAATTTCG TCGTGGTGCC TCTCATGGGT TACGGCGCCG TGGTGCTCGG TTTCTCTGCT
CTTCCACTCA TCTCAGTAGC CCCTTTCCTT GCCCGCTTGC TGCTTGTGGC CGCAGCGTTT
CTGGTAAAAA TATCCAATGC CTTCATACAG TTTCTGGCCC GGATTCCTTC CCTGCCGCTC
TTAAACCCAA CGCCCCTTGA CCTGTTTCTT TTTTACCTGG TGCTAGTTGT TCTCACTTTC
GTCTCGGGGA AGAGGACGCG GCTTGTCCTC TGCGGCTCGT TTCTGGCCGT ATCTGTTGCT
AACGCCCTGC TAGCTTCGGA ACGGGAAAGC GGCGGGCTGA AGATGACATT CTTCAGTGTC
GGCCAGGGAG AATCCACCCT GATAACCTTT CCCGACGGCA AGCGGATGCT CGTTGACGGT
GGCGGGTCGG CAAGGGAAGG TGCAAGCGAC GTCGGTGAAA GACTCCTTGC CCCCGCCCTG
TGGAGCATGG GCATCAGGCG CATCGACTAC ATGGTGCTGA CCCACATCCA TCCCGATCAT
CTCCAGGGAT TGCTCTATAT TGCCGATAAC TTTGATGTGG GTGAGTTCTG GGAGAGCGGT
GTTTATGCGG AGAGCGAGGA CTACCGGACA CTGAAACGCA TATTGGTGGC CAAAAGAGTG
CCGCTCCGGG AGGTCAATGC CTCCAATCCG GCTATTACCG TTGCCGGAGC CCGCATTGAA
TTCCTGTCGC CGGAATCCCC GGCACATGGC GGTGCAGATT GCAATCATGG GGATCCCAAT
GACGACTCCC TTGCCTTTCG CCTCGTTTAC AGGGAGGGGA GCGTCCTCTT CACCGGCGAC
ATGGGCACAG AAGCCGAGCA ACGCCTGATC TGCAATCCGC AGCGCCTGGG AGCGACGGTG
CTTAAGGTTG CGCACCACGG CAGCAGATAC TCCACGTCAC AGTCGTTTCT TGATGCAGTG
TCGCCGGAGA TTGCCGTAAT CTCTGCGGGC TACGGGAATA GTTTTCATCT TCCTGCTGCA
GAAACCCTTT CAAAGCTGCG GGGAAAAGGG GTCCAAACCT GTAGAACCGA TCTGGACGGC
ACTATTCATC TGGCCTATGA TGCAGCGGCC GAAAAATTTG CCGTTGTCAG GTAG
 
Protein sequence
MIERPLFIPL ASIIAGLSIA GFYSFFLPEN LLLPLLAVSF FTIFVRNRLS FLIAISLLFF 
CWGNLAVKPL IQPRLEINHI ANFVGDKTVT IEGVIDGRPE ATELGSRLYL HVERLFAGER
HAAVTGRLLL HVGEARVTFL TGDRVRFVTH LHKPRNYGLP GEFDYARFLA FKEVFVTAFV
KGADDVILIR EGVDNRPQRR IDHLASGMGR FIGSAIPGVE GSILRALLIG ERGYVPRKLE
DDYSRTGVNH ILSISGFHVG IIALFVFQLL LAAGRSSEFL TLHFNLRKCI LVITLPVIVF
YLLLSGTAPA TARSVIMIAA YVVALILERE VEPVSSLLLA AMVILALSPA ALFDISFQLS
FLALWGILIL TPLFMVPFTA VSNALLRKLL LFFMASFAAT IATLFPVAYY FHRVSFTGLI
SNFVVVPLMG YGAVVLGFSA LPLISVAPFL ARLLLVAAAF LVKISNAFIQ FLARIPSLPL
LNPTPLDLFL FYLVLVVLTF VSGKRTRLVL CGSFLAVSVA NALLASERES GGLKMTFFSV
GQGESTLITF PDGKRMLVDG GGSAREGASD VGERLLAPAL WSMGIRRIDY MVLTHIHPDH
LQGLLYIADN FDVGEFWESG VYAESEDYRT LKRILVAKRV PLREVNASNP AITVAGARIE
FLSPESPAHG GADCNHGDPN DDSLAFRLVY REGSVLFTGD MGTEAEQRLI CNPQRLGATV
LKVAHHGSRY STSQSFLDAV SPEIAVISAG YGNSFHLPAA ETLSKLRGKG VQTCRTDLDG
TIHLAYDAAA EKFAVVR