Gene Gura_1880 details

Gene Information

• Locus tag: Gura_1880
• ID: 5164653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 2181146
• End bp: 2181595
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640549371
• Product: RpiB/LacA/LacB family sugar-phosphate isomerase
• Protein accession: YP_001230643
• Protein GI: 148263937
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGCAA TCGGTAGTGA TCATGGCGGC CTGTCTCTGA AAGAGGCATT GAAAAAACTG 
TTGGCAGAGC GTGGAATCTC CTTTGAGGAC TGCGGCACCG ATAATGGTGA TTCCGTTGAT 
TATCCGGATT TCGGTGTAAA GGTGGCCAGG AAGGTTTCTT CGGGCGAAGT GGAGAAGGGG 
ATACTCGTTT GCGGCACCGG TATCGGTATG TCGATAGTGG CCAACAAATT TCCTCGAGTT 
CGCGCTGCAC TCGTAACGGA TTCTTTTATG GCGCAGATGG CCAAGGAACA CAATAACGCA 
AACATACTGG TGCTCGGCGG CAGGGTACTG GATGAGAACG CGGCCAGAAC GATGGTGGCA 
ACCTGGTTGG ATGCCACATT TGAGGGTGGC CGTCACCAGG CCAGGCTCGA CAAAATAGAA 
GACATCGAAA AGGAACTGCG TAGGTCGTAG 

 

Protein sequence

MIAIGSDHGG LSLKEALKKL LAERGISFED CGTDNGDSVD YPDFGVKVAR KVSSGEVEKG 
ILVCGTGIGM SIVANKFPRV RAALVTDSFM AQMAKEHNNA NILVLGGRVL DENAARTMVA 
TWLDATFEGG RHQARLDKIE DIEKELRRS