Gene Gura_1720 details

Gene Information

• Locus tag: Gura_1720
• ID: 5166163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 1995547
• End bp: 1996110
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640549216
• Product: TPR repeat-containing protein
• Protein accession: YP_001230488
• Protein GI: 148263782
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3063] Tfp pilus assembly protein PilF

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAAGG AAAGCATTCT TGGAGTAGTA GTCGCGCTGA TTGTCGGCCT TTTGGGCGGC 
TACCTGATTT TCAGCGTCAG TGCAAAAAAG GAAACAGTTC CGGTCAGCGG AAGCCTGCCC 
CAAGGGACCG GGTCGCCGAC CGATTATCAG CAGCGTATAG CCGAAGAGGA AAAAATTGTC 
GCCGGTGATC CGAAAAATCT CCAGGCATGG ATTCAACTGG GGAACGATTA TTTTGATACA 
GACCAATCAA AAAAAGCCGT AGATGCCTAC TCCAAAGCGC TGGAGCTTGA CCCCAACAAC 
ACTAACGTCT TGACCGATCA GGGTATCATG TACAGGAAAA TCGGTTGGTT CGACAAGGCG 
ATTGCAAATT TCGAGAAGGC GCAGCAGATT GATCCGAAAC ATTTGCAGAG CCTTTACAAC 
CTGGGTGTTA TTTATGCCAC CGACCTGAAA CAGCCGGACA AGGCGTTGAA AGCCTGGAGC 
CGTTACCTTG AGCTTGACCC CACAAGTCCT ACCGCACAGC AGATAAAGAT GCAGATGGAT 
CAGCTTAAAG CCAGTTCCAA GTAA 

 

Protein sequence

MKKESILGVV VALIVGLLGG YLIFSVSAKK ETVPVSGSLP QGTGSPTDYQ QRIAEEEKIV 
AGDPKNLQAW IQLGNDYFDT DQSKKAVDAY SKALELDPNN TNVLTDQGIM YRKIGWFDKA 
IANFEKAQQI DPKHLQSLYN LGVIYATDLK QPDKALKAWS RYLELDPTSP TAQQIKMQMD 
QLKASSK