| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1532 |
|---|
| Symbol | |
|---|
| ID | 5163753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1780783 |
|---|
| End bp | 1783176 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640549031 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001230303 |
|---|
| Protein GI | 148263597 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAG CTGCATTCGC TATCACCGGC ATGTCGTGCG TCAATTGCGC GGCCAGGATC
GAGAAGGCGC TCGGAGAGAC CGCCGGCATC AGCCGGGCTT CCGTTAACTT CGCCATGGAG
GAGTTGCTGG TAGAGTTCGA CGACGCTGTC ATCACTAGCG GGGCGATCGA GGAGAAGGTC
ACGAAGCTCG GGTACGGCAT CAGGGCCAAG GGGGGCGCAG GGGAGCTCCG CTTCGGCGTC
ATGGGGCTGC ACTGCGCCTC GTGCGTAAAC AACCTGGAGA AAAAGCTCCT CGCCGCGCCT
GGTGTGACTG CGGCGGTGGT TAATCTGGCG CAGGAGTCGG CCTTTGTCCG CTTCGATCCA
TCAACCATCG CCCCGGCGGA GATTTGTGCC GTGGTGACCG CAGCCGGCTA CCAGCCGGTT
CCGGAAGGGG CGGCAAAGGA GGACGAGGCA AAGACATACC GGAACCAGCG CAACTGGTTC
ATGGCGAGCC TCCTCCTCTC CCTCCCCATT ATGCTCACCA TGGGTGTGCA CCACATCCGG
GCCGTCGGGT GGATGAACCT GGTGCTGGCC TCCATCGTCC AGTTCACGGC CGGGCTCACC
TTCTACCGCG GCTCCTTCTA CGCCCTTAAA AGCCGCAGCG CCAACATGGA CGTGCTGGTG
GCCCTTGGGA CATCGGCGGC CTACTTCTAT TCCCTGTTTG CCTTCTTCGG CGCCTTCGGC
GAACATGGCG GCGAGGTCTT TTTCGAGACC TCGGCCATGC TGATCGCCTT CATCCGCCTC
GGCAAGTACC TGGAAGCCAG GGCCCGCGGC AAGGCAGGCG AAGCCCTGAA GAAGCTCCTC
AGGCTTCAGG CCGACAAGGC GCGGCTCATC ACGGATGAGG GGGAGAAAGA GGTGCCGGCC
TCCATGGTGC GGGTTGGCGA CCTGCTCCTG GTCCGCCCCG GCGAGACAAT CCCCACCGAC
GGAGAGATCG TGGAGGGAAG CACCAGCGTG GACGAATCCA TGGTGACCGG CGAGTCGGTG
CCTGCGGATA AGGTGGCAGG AGATGCTGTT ACCGGCGCCA CCATTAACCG GACCGGTCTT
ATCCGGGTGC GCGCCACGCG GGTGGGAGAG GAGACGCTCC TTTCCCAGAT CGTGAAAATG
GTGCAGGAGG CGCAAGGAGA CAAGGCGCCG ATCCAGCGCT TCGCCGACCG GGTCTCCGGT
GTGTTCGTGC CGGTGGTTGT GGCGCTGGCG CTCCTCACCT TCGGCCTATG GTACGCTCTG
CTTAACGAGC CGTTCCTCTT CGCCTTCAAG CTTGTCATCG CCGTTGTGGT CATCGCCTGC
CCCTGCGCCA TGGGGCTTGC CACGCCTACC GCCATCATGG TCGGGAGCGG AGTGGGGCTT
TCCCGCGGCA TCCTCATCAA ACGGGGGTCG GTGCTGGAGA ACATCTCCAG ACTTCAGGCA
ATCCTGCTGG ACAAGACCGG CACCCTGACC GAGGGGCGTC CGACGCTGAC CGACGTGGTT
GTAGCGAAGG CCGTGGACGA GGGGAGGTTC CTGGAATGCC TCGCCTCGGC CGAGTCACAG
TCGACCCACC CGCTGGCCCA GGCGGCGGTG CAGGGGGCGA CGGCGCGGGG AATCGCGCCC
GGTCCCGTTT CCGATTACCG TGAAAAAGGG GGATTCGGCG TTGCCTGCAC CTTCGGCGGC
ATGCAGCTTA TGGCCGGGAG CGCCCGCCTC CTGGAAGAGG CCGGCATCTC CGTTGCGTCG
CTGGAGGCTT CCGCGCTACG GCTTGCCGAA GAGGGGAAAT CGCTGATCTA TGTGGCGGCG
GGCGAGCGGC TCCTCGGCAT CGCTGCCCTG GCCGACAGGC TGAAGGCGTC TTCGGCGGCC
GCGGTGGTGG AGATGCGGCG CCTCGGGATC AAGACTTTCA TGATCACCGG CGACCAGAGG
GCCGTGGCCG CTGCCATTGC GCGTCAGGTG GGAGTGGACG GCTTCGAGGC GGAGGTCCTC
CCCGACAGGA AGCAGCAGGT GGTGAAGGAG TACCAGGAGA AAGGGCTGTC GGTGGGGATG
GTGGGGGACG GCATCAACGA CGCCCCTGCC CTGGCCCGGG CCGACATCGG TATCGCCATC
GGCGGCGGGA CCGACGTGGC CAAGGAAACC GGCGACGTTA TCCTGGTGCG CGACGACCTG
ATGGACGCAG TGCGGGCTAT CAGGTTAGGG CGGGCCACGC TGGCGAAGAT CAAGCAGAAC
CTCTTCTGGG CACTCTTCTA CAACATCCTC GGCATCCCCA TCGCCGCCGG GGTTCTCTAC
TATCCATTGG GGATCACCCT GAAGCCCGAG TTCGCCGGCC TCGCCATGGC CTTCTCTTCG
GTTTCGGTGG TGACCAATTC GCTGCTGCTG AAACGGGTGA GAAATAAGTT GTGA
|
|---|
| Protein sequence | MQKAAFAITG MSCVNCAARI EKALGETAGI SRASVNFAME ELLVEFDDAV ITSGAIEEKV
TKLGYGIRAK GGAGELRFGV MGLHCASCVN NLEKKLLAAP GVTAAVVNLA QESAFVRFDP
STIAPAEICA VVTAAGYQPV PEGAAKEDEA KTYRNQRNWF MASLLLSLPI MLTMGVHHIR
AVGWMNLVLA SIVQFTAGLT FYRGSFYALK SRSANMDVLV ALGTSAAYFY SLFAFFGAFG
EHGGEVFFET SAMLIAFIRL GKYLEARARG KAGEALKKLL RLQADKARLI TDEGEKEVPA
SMVRVGDLLL VRPGETIPTD GEIVEGSTSV DESMVTGESV PADKVAGDAV TGATINRTGL
IRVRATRVGE ETLLSQIVKM VQEAQGDKAP IQRFADRVSG VFVPVVVALA LLTFGLWYAL
LNEPFLFAFK LVIAVVVIAC PCAMGLATPT AIMVGSGVGL SRGILIKRGS VLENISRLQA
ILLDKTGTLT EGRPTLTDVV VAKAVDEGRF LECLASAESQ STHPLAQAAV QGATARGIAP
GPVSDYREKG GFGVACTFGG MQLMAGSARL LEEAGISVAS LEASALRLAE EGKSLIYVAA
GERLLGIAAL ADRLKASSAA AVVEMRRLGI KTFMITGDQR AVAAAIARQV GVDGFEAEVL
PDRKQQVVKE YQEKGLSVGM VGDGINDAPA LARADIGIAI GGGTDVAKET GDVILVRDDL
MDAVRAIRLG RATLAKIKQN LFWALFYNIL GIPIAAGVLY YPLGITLKPE FAGLAMAFSS
VSVVTNSLLL KRVRNKL
|
|---|
| |