| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1321 |
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| Symbol | |
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| ID | 5163844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 1558733 |
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| End bp | 1560649 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640548822 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001230095 |
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| Protein GI | 148263389 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.002861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CTTCCAAAAT ACCAGGAAAG AACAAGATTC ACCGCGAAAA ACGTTCCTCG
TCGCCTGAAA CGGAAAACGA CGACATCAGT CTGTGGCATG AGCCTTTCGT GCATGTCGTT
TTCATTATTG CCGCTGGATT TTTCGTATAC TTCAACACCG TCACAACCCC GTTCCTGTTT
GACGATTATC TGTATTTGGT GAATAACCCT GCCATTAAAG ATTTCAGCTA TTTCGCCGAT
ACAGACCGGA TTCTTAATCT TGGAATTAAT CCTGATATCA AAAACAACTT TATCCTGCGG
CCTGTTTCCT ACTTCACCTT CGCCCTGAAC TACGCGCTCC ACGGACTCGA TGTTCGGGGG
TACCATGTTG CAAACCTGAT CATTCATATC GGAAACGCCC TGCTTGTCTA TCTTCTGCTC
TCTCTTTCGT TACAGACTCC TGCAATGGCT GCGGACGAAC AGGAGAAAAG CGATTCTCCT
GCGGTAAAAT TGCGCTACCT GCCACTTTTC TGTGCTTTGC TTTTTGCCTG TCATCCGCTG
CAAACCCAGG CGGTAACCTA CATCATCCAA CGATTCACTC CACTCGTCAC CCTGTTTTAT
CTCGGCTCGC TGGTCCTGTA TGTGAAAGGC AGGCTTGGCG CGACGACAAC TGCCCGCACG
GCCTGTTACG TAATTTCTGT TATCGCCGCG ATTCTTGCCA TGAAAACGAA GGAAAATGCC
TTCACGCTCC CTGTCATTAT TACCCTGTTC GAGTTTATCT TCTTTTACGG GAGCATCGGC
AAGAGGATTG CCAGACTGGT TCCTTTTCTG TTAACCATGG CAATTATTCC CGTCGATCTC
ATGGAGTTAT CATCCCTGGC AAAACCAGAC GAATCCGACG CCATCATCGA CTCGATAAAC
CTGGTTAATT TTCGCAGTGT ATCCCCATGG GACTACCTGA TGACCCAATT CGGCGTCATC
ACCACCTATC TCCGGTTGCT GGTTATGCCG ATCGGGCAAA ATTTCGATTA TGATTACCCT
CTCCAGAAAA ACTTTTTCAG TTCCGCGGTA CTGATGCCCC TCGGCTTCCT TCTGCTGATT
CTGGGGACGG GCATATATGT ACTTTACCGG TCAAGGGATC GTCGTCTTCC CGAACGTCAT
CTTTTCAAAA TCATTGCCTT CGGTATTTGC TGGTTTTTCA TCACCCTGTC GGTAGAGTCA
AGCATCATTC CCATCGACGA CCTTATCTTC GAGCACAGGG CATATCTCCC CTCCATAGGC
TTTTTCATGT CAATCATTGC AGGGATCGCA TCTCTCTACA GCCATCGTAC GGGGAAATCT
TTCTTTGCAT CCAAAGTCGC GCTCAGAACA CTGAGTGCCG TCATTTTGTG CCTCTCGGCA
GCCGGCATGG CAAGAAATAC GATATGGGCG GACAGTGTAA CATTCTGGAG CGACGTAGCC
AGAAAAAGCC CAAAAAAATC CAGGGTTCAT ACCAACTTGG GAATCGCCCT GTTCGAACAG
GGAAAAACAG GGGCAGGGAT TGAGGAATTT CGGACCGCAA TAAGACTCAA ACCAAGTGAT
ACAAACGCAC GTATCAACCT TGGGAAATCC CTGCTCATTC AAAAAATGTA CGATGAAGCA
GCCAGTGAGC TGTTGACTGC CGCGCGTTTG AATCCACATG ATCCCGTTCC ACATGTATTT
CTCGGGCTGG TATATGAAGG CAAAGGAGAA TTATCCAACG CACGGTGGGC ATATCTTGCT
GCAATAAAAA TCTCGCCCGC TTCCCCGGAT GCACACATAC GCCTCGGAGA GCTTTATGCC
AAGGAAGAAA AGATACAGGA TGCCAAAAGG GAATATGAAG CGGCACTGCG CCTTTATCCT
GACGAAATCA TAAGAAAAAA GATTGTTGAG CTTAATCGCA TGCAAGACAA GAGATGA
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| Protein sequence | MKKSSKIPGK NKIHREKRSS SPETENDDIS LWHEPFVHVV FIIAAGFFVY FNTVTTPFLF
DDYLYLVNNP AIKDFSYFAD TDRILNLGIN PDIKNNFILR PVSYFTFALN YALHGLDVRG
YHVANLIIHI GNALLVYLLL SLSLQTPAMA ADEQEKSDSP AVKLRYLPLF CALLFACHPL
QTQAVTYIIQ RFTPLVTLFY LGSLVLYVKG RLGATTTART ACYVISVIAA ILAMKTKENA
FTLPVIITLF EFIFFYGSIG KRIARLVPFL LTMAIIPVDL MELSSLAKPD ESDAIIDSIN
LVNFRSVSPW DYLMTQFGVI TTYLRLLVMP IGQNFDYDYP LQKNFFSSAV LMPLGFLLLI
LGTGIYVLYR SRDRRLPERH LFKIIAFGIC WFFITLSVES SIIPIDDLIF EHRAYLPSIG
FFMSIIAGIA SLYSHRTGKS FFASKVALRT LSAVILCLSA AGMARNTIWA DSVTFWSDVA
RKSPKKSRVH TNLGIALFEQ GKTGAGIEEF RTAIRLKPSD TNARINLGKS LLIQKMYDEA
ASELLTAARL NPHDPVPHVF LGLVYEGKGE LSNARWAYLA AIKISPASPD AHIRLGELYA
KEEKIQDAKR EYEAALRLYP DEIIRKKIVE LNRMQDKR
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