| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1305 |
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| Symbol | |
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| ID | 5164409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 1538363 |
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| End bp | 1540381 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640548806 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001230079 |
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| Protein GI | 148263373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.617786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAC AGGCCGCAGA GCGCCGCATA CAGGAACTTC ACAAGGAAAT AAACCGCCAC
AACTACCTCT ATTACGTGGA AGACCGGCCG GAGATCAACG ACGCCGAGTA CGACCTGCTC
CTGCGCGAGT TGCAGCAACT GGAAAAGGCA TACCCCGACC TTGTCACTGC CGATTCTCCC
ACCCAGCGGG TCGGGGCAGC TCCGCTGGAA AAGTTCTCCC AGGTGACCCA CCGCATGCCG
ATGCTCTCAC TGGAAAATGC CTTCAACGAA GAGGAGATGC ATGACTTCGA CGAACGGATC
AAGCGATTCC TCGGCCTTGC CGCCGGCGAT GAAATAGAAT ATGTCTGCGA ACCGAAGATG
GACGGCCTGG CAGTGGAACT GGTCTATGAG AACGGCGACT TCACCGTCGG CTCGACCCGC
GGCGATGGAT ATGTAGGTGA AGACGTGACC CAGAACCTGC GGACAGTCAA GACCATCCCG
CTTAGCCTTG CCATCGCCAC CCCACCGCGG CTCTTCGAGG TGCGTGGCGA GGTCTACCTC
GGCCTTGCCC CATTTCAAAA GCTGAACGTG GAACGGGAAG AGGCCGGCGA CCCTCCATTC
GCCAACCCGC GGAACGCCGC AGCCGGCAGT TTGCGCCAGC TCGACTCGCG GATAACCGCC
CGGCGCCCCC TCTCCATCTT CTGCTATGCG GCAGGCTCTC TGGAAGGTCA CGAGTTCACG
TCGCAAAGCG ACCTGCTCAA CACCATTCCC GGTTGGGGAC TGCCGGTCAA CCCTCTGATC
AGAAAGGTTT CCGGCATCGG CGGGGTACTC GCCTATTACC ACGAGATGAG CGAGAAACGG
GAGTCGCTCC CCTACGAGAT CGACGGCGTG GTGGTCAAGG TCGATTCCTT TGATCTGCAG
CGGGAGCTGG GAGAAAAGAC CCGCTCGCCC CGCTGGGCCA TTGCCTGGAA ATTCCCCCCA
CGCCAGGCGG TCACCGTGGT CGAGGAGATC GTCCCCCAGG TTGGTCGCAC CGGCGTCATC
ACCCCGGTGG CCCATCTCCG GCCGGTGGAG GTATCGGGGG TGATGGTGTC CCGCGCTACT
TTGCACAATT GGGAGGAGAT GGAGAAAAAG GACATCCGCA AGGGGGACAC GGTGGTGGTG
GAGCGGGCCG GGGACGTGAT CCCGGCGGTG GTGAAGGTCA TCACCGAGAA GCGTAAAGGC
GACGAACAAC CGCTACCCAT CCCCGCCAAC TGCCCCGAAT GCGGCTCAGA AGTGGTGAAG
ATCCCCGGCG AGGTGGCGGT CCGCTGCCTC GGCCTCTCCT GTCCGGCGCA GATCCGCGAA
ACCATCATCC ATTTCGCCTC GCGCCACGCC ATGGATATCG ACGGGATGGG GGACAAATAC
ATTGAACAGC TGCTGAAGCT CGGCCTGGTG AAAAATGTCG CCGACCTCTA TTACCTGAAG
AAGGATGACT TCATGCGCTT CGAGCGGATG GGAGACAAAC TGGCGGAAAA CCTCCTGGGC
GCCATCGAAA CAAGCAAGCA GCGGGAGCTA TCCCGATTCA TCTACGCCCT CGGCATCCGC
CACGTTGGAG AGCATACGGC AAAGCTTCTG GCAAACGCCT TCGGCAGCAT GGAGAACCTG
GAGCACGCCT CGGAAGAGGA ACTCCTCTCC ATCCGCGAGG TCGGCCCCCA GGTGGCGCAG
AGCATTCGTA CCTTCTTCCA CAACCGTAAC AACATCGAGG TGATCGACCG GATGTTCAAC
GCCGGGGTGA AGCCATCCGT TGAGGAGAAA AGGGTCGGCG GCAGGTTCAC AGGCAAGACC
TTCGTCTTCA CCGGCGCCCT TACCCGCTTC ACCAGGGACG ACGCCAAGCG GATGGTGGAA
AACGAGGGGG GGCACGCCGC CGGCTCGGTA TCGAAGAAGA CCGACTTCGT CGTGGCCGGC
GCAGAGGCTG GGTCGAAGCT GGACAAGGCA CGACAGCTAG GGGTGAAGGT GCTCACGGAA
GACGAGTTTT TAGCGATGTT AGGAGTCTGT CGGACTTAG
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| Protein sequence | MDKQAAERRI QELHKEINRH NYLYYVEDRP EINDAEYDLL LRELQQLEKA YPDLVTADSP
TQRVGAAPLE KFSQVTHRMP MLSLENAFNE EEMHDFDERI KRFLGLAAGD EIEYVCEPKM
DGLAVELVYE NGDFTVGSTR GDGYVGEDVT QNLRTVKTIP LSLAIATPPR LFEVRGEVYL
GLAPFQKLNV EREEAGDPPF ANPRNAAAGS LRQLDSRITA RRPLSIFCYA AGSLEGHEFT
SQSDLLNTIP GWGLPVNPLI RKVSGIGGVL AYYHEMSEKR ESLPYEIDGV VVKVDSFDLQ
RELGEKTRSP RWAIAWKFPP RQAVTVVEEI VPQVGRTGVI TPVAHLRPVE VSGVMVSRAT
LHNWEEMEKK DIRKGDTVVV ERAGDVIPAV VKVITEKRKG DEQPLPIPAN CPECGSEVVK
IPGEVAVRCL GLSCPAQIRE TIIHFASRHA MDIDGMGDKY IEQLLKLGLV KNVADLYYLK
KDDFMRFERM GDKLAENLLG AIETSKQREL SRFIYALGIR HVGEHTAKLL ANAFGSMENL
EHASEEELLS IREVGPQVAQ SIRTFFHNRN NIEVIDRMFN AGVKPSVEEK RVGGRFTGKT
FVFTGALTRF TRDDAKRMVE NEGGHAAGSV SKKTDFVVAG AEAGSKLDKA RQLGVKVLTE
DEFLAMLGVC RT
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