| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1183 |
|---|
| Symbol | |
|---|
| ID | 5163749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 1395467 |
|---|
| End bp | 1396531 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640548687 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001229960 |
|---|
| Protein GI | 148263254 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAT TTCTGCCGCT GGTCATCGCG CTCAGTCTGC TGGCAGGGGG TTGCGGCTTC
GGATGGTACT GGCTCTCCAC CGGGCGGTTC ATGGAAAAAA CCGACAACGC CTACATCCGG
TCTGAAATAA CCCAGGTCAG CTCGAAAGTG TCAGGCTACG TTAAAGATGT GCCGGCCGAG
GACAATACAC TGGTTGCCGC CGGCGATCCC CTGGTGCGCA TCGAGGATCT GGAGTTCGGG
GTCAGGCTGG AGCTCGGCCG GAAAAAGCTG GAGGAGCGAA AGGCTGCCCA GCTCGTTGCG
TACAACAGAA GCAGGCTGCA AGATTCCCGT ATCGATGCAT GCACAGCGCA ACTGGCTGCC
GCCAGGGCGG AGCAGCTCAA AAAAACCGGC GATCTCCGCC GGTTCGGCAG TCTGTTTCCC
GATGGCATTG TTTCCGAGCT GGATTACGAT GCTGTGGTAA CAGCCGAGAA AAAAGCACGG
GCCGAGACAG GGAGCGCAGT TGCCAACCTG AAGATGGCGG AAAGTGAGCT GGCGGCTCTC
CTGGCCGAGG AGCGCCGCCT CGAAGCCGAG CTTCACCAGC AGGAAGAAGA GTTGAAGCTT
CTCGCTAAGG AGCTTGCCGA TACGGTGGTC CGCTCCCCGA TTACGGGGGA GGTCGGCAAT
CGCCGGGTTC GGGCCGGACA GTACGTCAAG CCGGGAACGG TCCTCTTGAC GGTGATTCCC
CGCAATGTCC TCTGGGTGGA GGCGAACTTC AAGGAAGTTC AGCTATCCCG CATGCATGAG
GGACAACCGG TTTCAATCGA GGTCGACGCC TTCCCCGGGC GCCCACTGAC CGGCCGGGTC
GAATCGCTTT CCCCGGCGAG CGGCGCGGAG TACAGCGTGC TTCCTCCCGA AAATGCCACC
GGCAACTTCA CTAAGATCGT CCAGCGGGTG CCCGTCAAGA TCCGCTTCCA ACCGGGACAG
CCCCTGCTCC GCGAGCTGCG GGCAGGCATG TCGGTTGTCG TGAGCCTGGA TACCCGGCCC
GGTTCAGGCA GCGGCCCCGC GGTCAGCCGC CTGAATCGGC GTTAG
|
|---|
| Protein sequence | MRKFLPLVIA LSLLAGGCGF GWYWLSTGRF MEKTDNAYIR SEITQVSSKV SGYVKDVPAE
DNTLVAAGDP LVRIEDLEFG VRLELGRKKL EERKAAQLVA YNRSRLQDSR IDACTAQLAA
ARAEQLKKTG DLRRFGSLFP DGIVSELDYD AVVTAEKKAR AETGSAVANL KMAESELAAL
LAEERRLEAE LHQQEEELKL LAKELADTVV RSPITGEVGN RRVRAGQYVK PGTVLLTVIP
RNVLWVEANF KEVQLSRMHE GQPVSIEVDA FPGRPLTGRV ESLSPASGAE YSVLPPENAT
GNFTKIVQRV PVKIRFQPGQ PLLRELRAGM SVVVSLDTRP GSGSGPAVSR LNRR
|
|---|
| |