Gene Gura_1067 details

Gene Information

• Locus tag: Gura_1067
• Symbol: rplC
• ID: 5166004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 1273383
• End bp: 1274018
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640548568
• Product: 50S ribosomal protein L3
• Protein accession: YP_001229846
• Protein GI: 148263140
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0000374639
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGG GATTGATTGG TAAAAAACTT GGAATGACAC AAATCTTTGC TGAAGACGGG 
CGCCGTATAC CGGTGACTGT TGTTGAAGCC GGTCCTTGTG TTGTTATTCA AAAGAAGACC 
AAAGAAAAAG ATGGCTACAG TGCTATCCAG GTGGGTTTTA ACTCACAGGA GGCTGCAAAA 
GCCAACAGTG CAGTGGTTGG TCATTGCAAA ACTGCCGGGA GCGGCGTATT TTCTTTCTTA 
CGCGAGCTGC GCGTGGATAA TGCAGATCAA TACAGTGTTG GTGATGTGCT TAGTGCTGAA 
ATATTTGCAC CTGGTGATCT GGTTGACGTA ACCGGGACAA GTATTGGTAA AGGTTTTCAG 
GGTGTAATGA AACGTTGGGG CTTCAAGGGC GGGCGAGCAA GCCATGGTTC TCGCTTTCAT 
CGTGCTCCTG GTTCCATTGG CTGTTCAGCA ACACCTTCAC GTGTCTTTAA AAACAAGAAG 
ATGCCTGGTC AGCTCGGAAA CGAAAAAGTG ACTGTGCAGA GACTTAAGAT TGTAAGGGTT 
GATGCAGCTG ATAACCTTAT TTTGTTGAAT GGTGCGATAC CTGGATCTAC AAATGGTCTG 
GTTCTTATCA AAGACAGTGT TAAGGCTAAG AAATAA 

 

Protein sequence

MNKGLIGKKL GMTQIFAEDG RRIPVTVVEA GPCVVIQKKT KEKDGYSAIQ VGFNSQEAAK 
ANSAVVGHCK TAGSGVFSFL RELRVDNADQ YSVGDVLSAE IFAPGDLVDV TGTSIGKGFQ 
GVMKRWGFKG GRASHGSRFH RAPGSIGCSA TPSRVFKNKK MPGQLGNEKV TVQRLKIVRV 
DAADNLILLN GAIPGSTNGL VLIKDSVKAK K