Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1058 |
Symbol | rplA |
ID | 5164568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 1258347 |
End bp | 1259048 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640548559 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_001229837 |
Protein GI | 148263131 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.30711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACTA GTAAAAAGCT TAAAGAAGCT CTTGCCAAAG TGGACAGGAG TAAAAGCTAT ACCCTGAAAG ATGGGATTGA GCTTGTTAAG AACACCGCCT TTGCCAAGTT CACCGAGACT GTTGACGTTG CCGTCAGGCT GGGCGTTGAT CCGCGGCATG CAGACCAGAT GGTACGTGGC GCCGTGGTGC TTCCTAATGG TTTGGGCAAG GACGTGAGAG TCCTGGTTTT TGCCAAGGGA GAAAAAGAGA AGGAAGCCCG TGATGCCGGT GCTGACTTTG TCGGGGCCGA CGATCTAGTT GCCAAGATTC AGGAAGGTTG GTTTGACTTC GATACCGCAA TTGCTACACC TGACATGATG GGCGTTGTCG GTAAGATTGG CAAGCTTCTC GGACCACGCG GCTTGATGCC TAACCCCAAA GTGGGAACCG TTACCTTCGA TGTCGGCCGT GCAGTCAACG AGTCCAAATC CGGTAAGGTA GAGTTCAGGG TTGAAAAGGC GGGGATTATT CACGCTCCTG TCGGCAAAGT TTCTTTTGAT GCGGACAAGC TTAAGGAAAA CATCCTGGCT CTGGTGGATG CGCTGGTTAA ATCTAAGCCT TCAGCAGCTA AAGGCACCTA TATCAAGAAA ATCAGTGTTT CTTCAACTAT GGGACCTGGT GTCAATCTTG ATGTGTCTGA CGTTTCTTCG CAGGTAGTCT AG
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Protein sequence | MPTSKKLKEA LAKVDRSKSY TLKDGIELVK NTAFAKFTET VDVAVRLGVD PRHADQMVRG AVVLPNGLGK DVRVLVFAKG EKEKEARDAG ADFVGADDLV AKIQEGWFDF DTAIATPDMM GVVGKIGKLL GPRGLMPNPK VGTVTFDVGR AVNESKSGKV EFRVEKAGII HAPVGKVSFD ADKLKENILA LVDALVKSKP SAAKGTYIKK ISVSSTMGPG VNLDVSDVSS QVV
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