| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1048 |
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| Symbol | truA |
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| ID | 5166390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1250158 |
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| End bp | 1250892 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640548544 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001229827 |
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| Protein GI | 148263121 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000774285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCAGA TAAAGCTGAT AATAGAATAC GACGGCACCA ATTATTCCGG CTGGCAGGTC
CAGCCGAACG GCATCACCAT CCAGCAACTG ATTGAAGCGT CACTGGCAAC GATGCTCGGC
GAACCGGTCA AGCTTCATTC ATCCGGCAGG ACCGATGCCG GTGTTCATGC GCTGGGAATG
GTTGCTGCGT TTAAAACGGG GAAACTGCTG CCGTTGCGTG CCTTTTCCGA CGGGCTCAAT
GCTTTGCTGC CGAACGATAT AGCCATCAGG GATGCCGTTG AGGCCCCGCT TTCGTTCAAT
CCACGCGCTG ACGCAAAGAG CAAGCATTAC CGTTACACGA TATATAACGC CGTTCGCCGC
TCGCCACTGG CACGCCTCAG TTCGTGGCAT CTGCGCGGGG CACTGGACAT TGAGCGTATG
CAGGCCGCGG CTTCCCATTT TGTCGGTGAG CATGATTTTG CCGCTTTCCG CGCCTCCAAC
TGCGCAGCCA AAACCACGGT GCGCCGTCTT TTCAGCGTAT CTGTTGCGAA GGATGGGGAA
TCTGTCATTA TTGATGTGCA CGGATCGGGG TTTCTGAAAA ATATGGTGAG GATCATCGCC
GGTACGCTCG CAGAGGTAGG ACAGGGGAAA AAAAATCCGG ATGCGGTTCC CGGATTACTT
GTTTCAGGCG ACAGGGCCGC TTCAGGCATT ACGGCGCCGC CGCAAGGGCT CTGTCTCGTG
GAAGTTTTTT ATTGA
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| Protein sequence | MRQIKLIIEY DGTNYSGWQV QPNGITIQQL IEASLATMLG EPVKLHSSGR TDAGVHALGM
VAAFKTGKLL PLRAFSDGLN ALLPNDIAIR DAVEAPLSFN PRADAKSKHY RYTIYNAVRR
SPLARLSSWH LRGALDIERM QAAASHFVGE HDFAAFRASN CAAKTTVRRL FSVSVAKDGE
SVIIDVHGSG FLKNMVRIIA GTLAEVGQGK KNPDAVPGLL VSGDRAASGI TAPPQGLCLV
EVFY
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