Gene Gura_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_0805 
Symbol 
ID5165334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp960776 
End bp962857 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content65% 
IMG OID640548303 
Productglycogen debranching enzyme GlgX 
Protein accessionYP_001229586 
Protein GI148262880 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02100] glycogen debranching enzyme GlgX 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAC CCATCGACAG CGGCACATCA TCTCCCCTCG GCGCCACGGT CTTTCCCGGC 
GGGGTGAACT TCAGCATCTT CTCGCGTGAC TGCACCGGCG TCGAGCTGCA CCTCTTCGAC
CGGGTCGACG ACGCCCGGCC GTCCCGAACC GTAACGCTCC ACCCGAAGCG CAACCGCACC
TACCATTACT GGCATACTTT TGTCCCCGGC CTTGGGTCGG GCCAACTGTA CGGCTACCGC
GTCGCCGGTC CCCATGACCC CCGGCGGGGA CTCCGGTTCG ACCCGTACAA GCTCCTCATC
GACCCCTATG GCCGGGCGGT GGCGGTCCCG GCCGGCTACA GCCGCCGTGC CGTGGCCGAG
CCGGGCGACA ACGCGGCAGT GGCCATGAAG AGCGTGGTAG CCGACCCCCG CGGGTACGAC
TGGGAAGGGG ACATCCCCTT GAAGCGCCCC TTCTCGCGGA CCGTGATCTA TGAACTGCAT
GTGGCCGGCT TCACCCGCCC CCCCTCGTCG GGGGTCACAG AGGGGAAGCG CGGCACCTAT
GCGGGACTGG TGGAGAAGAT CCCCTACCTG CAGGAACTGG GGGTCACCGC CATCGAGCTC
CTGCCGGTCT TCCAGTTCGA TGCCCGGGAC GCTCCCGAGG GGTTCGACAA CTACTGGGGC
TACAGCCCCA TCTCCTTCTT CGCCCCCCAT GCGGCATACA GTTCCCGCCC GGACCCGCTC
GGCCCGCTCG ACGAGTTCCG CGACATGGTA AAGGCACTCC ACCGGGCCGG CATCGAAGTG
ATCCTCGACG TGGTCTTCAA TCATACCGCC GAAGGAGATG ACCGCGGGCC AACCCTCTGC
TACCGGGGGC TGGCGAATAA TTTCTACTAC ACGCTGGAGC CCGATGGCGA AACCTACGCC
AACTATTCCG GCTGCGGCAA CACACTCAAC GCCAACAATC CCATCGTCCG GCGGCTCATC
AGCGACAGCA TTCATTACTG GGTGAGGGAG ATGCACGTGG ACGGCTTCCG TTTCGATCTG
GCCTCCATCC TCGCCCGCGA CGAGCGTGGA GACCTCCTGG AGAACCCGCC GCTTCTCTGG
GACATCGAAA CGGACCCGGC CCTGGCGGGG ATCAAGCTGA TTGCCGAGGC CTGGGACGCG
GCCGGCCTTT ACCAGGTGGG GAGCTTCATC GGCGACAGCT GGAAGGAGTG GAACGGCAAG
TTCCGTGACG ACGTGCGGAG CTTCCTCAGG GGTGACGCCG GCACGGTCAC CCGCTTCGCC
TCGCGGCTCC TGGCCAGCCC CGACATCTAC GGCCACCAGG AACGGGAACC GGAGCAGAGC
ATCAACTTCG TCACCTGCCA CGACGGCTTC ACCCTCAACG ACCTCGTCTC CTACAACCGG
AAGCACAACG AAGCCAACGG CGAGGAGAAT CGCGACGGGA CCGACCTCAA CCTGAGCTGG
AACTGCGGCG GCGAGGGCCC CTCCGACGAC CCGGCAATCG AGGCGCTCCG CAACCGCCAG
GTGAAGAACT TCCTGACGGT AACCCTCCTC GCCCTCGGCG CGCCGATGCT CCTCATGGGG
GACGAGGTGC GCCGCACCCA GTGGGGAAAC AACAACGCTT ACTGCCAGGA CAATGAGACC
GGCTGGTTCG ACTGGGGGCT GCTTGAGCAA CATAGCGACG TCCGCCGCTT CGTGCGTCTT
TTGATTGACG CACGACTGAA GCGCGACCTG GCGGTTGAGG ACCCCGACCT GACCCTCAAC
CAGCTCCTCC GCCAGGCACG GCTTGAGTGG CACGGCGTAA GGCTGGGGCG GCCCGACTGG
GGAGATAACT CGCACAGCAT TGCCCTCACG ACCTGGAGCC TGACCGGCCG TTTCGTCTTC
CATCTCATGG TCAACGCCTG GCGGGAGTCC CTCGCGTTTG AGCTCCCCCT GGTCCGTAAG
CAGCCGGGAG TGGGCTGGCG CCGCTGGCTC GACACTTCCC TCGCATCTCC CGCCGACATC
GTGCCGTTGG ACGAGACGCC GGCGGTCGAA GGAAAAACCT ATGAACTGCC GCCGCACTCG
CTGGCTGTCA TGTTTGCCCG TGCTCCTGCG GGCGCAGGCT GA
 
Protein sequence
MNSPIDSGTS SPLGATVFPG GVNFSIFSRD CTGVELHLFD RVDDARPSRT VTLHPKRNRT 
YHYWHTFVPG LGSGQLYGYR VAGPHDPRRG LRFDPYKLLI DPYGRAVAVP AGYSRRAVAE
PGDNAAVAMK SVVADPRGYD WEGDIPLKRP FSRTVIYELH VAGFTRPPSS GVTEGKRGTY
AGLVEKIPYL QELGVTAIEL LPVFQFDARD APEGFDNYWG YSPISFFAPH AAYSSRPDPL
GPLDEFRDMV KALHRAGIEV ILDVVFNHTA EGDDRGPTLC YRGLANNFYY TLEPDGETYA
NYSGCGNTLN ANNPIVRRLI SDSIHYWVRE MHVDGFRFDL ASILARDERG DLLENPPLLW
DIETDPALAG IKLIAEAWDA AGLYQVGSFI GDSWKEWNGK FRDDVRSFLR GDAGTVTRFA
SRLLASPDIY GHQEREPEQS INFVTCHDGF TLNDLVSYNR KHNEANGEEN RDGTDLNLSW
NCGGEGPSDD PAIEALRNRQ VKNFLTVTLL ALGAPMLLMG DEVRRTQWGN NNAYCQDNET
GWFDWGLLEQ HSDVRRFVRL LIDARLKRDL AVEDPDLTLN QLLRQARLEW HGVRLGRPDW
GDNSHSIALT TWSLTGRFVF HLMVNAWRES LAFELPLVRK QPGVGWRRWL DTSLASPADI
VPLDETPAVE GKTYELPPHS LAVMFARAPA GAG