Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0805 |
Symbol | |
ID | 5165334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 960776 |
End bp | 962857 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640548303 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_001229586 |
Protein GI | 148262880 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAC CCATCGACAG CGGCACATCA TCTCCCCTCG GCGCCACGGT CTTTCCCGGC GGGGTGAACT TCAGCATCTT CTCGCGTGAC TGCACCGGCG TCGAGCTGCA CCTCTTCGAC CGGGTCGACG ACGCCCGGCC GTCCCGAACC GTAACGCTCC ACCCGAAGCG CAACCGCACC TACCATTACT GGCATACTTT TGTCCCCGGC CTTGGGTCGG GCCAACTGTA CGGCTACCGC GTCGCCGGTC CCCATGACCC CCGGCGGGGA CTCCGGTTCG ACCCGTACAA GCTCCTCATC GACCCCTATG GCCGGGCGGT GGCGGTCCCG GCCGGCTACA GCCGCCGTGC CGTGGCCGAG CCGGGCGACA ACGCGGCAGT GGCCATGAAG AGCGTGGTAG CCGACCCCCG CGGGTACGAC TGGGAAGGGG ACATCCCCTT GAAGCGCCCC TTCTCGCGGA CCGTGATCTA TGAACTGCAT GTGGCCGGCT TCACCCGCCC CCCCTCGTCG GGGGTCACAG AGGGGAAGCG CGGCACCTAT GCGGGACTGG TGGAGAAGAT CCCCTACCTG CAGGAACTGG GGGTCACCGC CATCGAGCTC CTGCCGGTCT TCCAGTTCGA TGCCCGGGAC GCTCCCGAGG GGTTCGACAA CTACTGGGGC TACAGCCCCA TCTCCTTCTT CGCCCCCCAT GCGGCATACA GTTCCCGCCC GGACCCGCTC GGCCCGCTCG ACGAGTTCCG CGACATGGTA AAGGCACTCC ACCGGGCCGG CATCGAAGTG ATCCTCGACG TGGTCTTCAA TCATACCGCC GAAGGAGATG ACCGCGGGCC AACCCTCTGC TACCGGGGGC TGGCGAATAA TTTCTACTAC ACGCTGGAGC CCGATGGCGA AACCTACGCC AACTATTCCG GCTGCGGCAA CACACTCAAC GCCAACAATC CCATCGTCCG GCGGCTCATC AGCGACAGCA TTCATTACTG GGTGAGGGAG ATGCACGTGG ACGGCTTCCG TTTCGATCTG GCCTCCATCC TCGCCCGCGA CGAGCGTGGA GACCTCCTGG AGAACCCGCC GCTTCTCTGG GACATCGAAA CGGACCCGGC CCTGGCGGGG ATCAAGCTGA TTGCCGAGGC CTGGGACGCG GCCGGCCTTT ACCAGGTGGG GAGCTTCATC GGCGACAGCT GGAAGGAGTG GAACGGCAAG TTCCGTGACG ACGTGCGGAG CTTCCTCAGG GGTGACGCCG GCACGGTCAC CCGCTTCGCC TCGCGGCTCC TGGCCAGCCC CGACATCTAC GGCCACCAGG AACGGGAACC GGAGCAGAGC ATCAACTTCG TCACCTGCCA CGACGGCTTC ACCCTCAACG ACCTCGTCTC CTACAACCGG AAGCACAACG AAGCCAACGG CGAGGAGAAT CGCGACGGGA CCGACCTCAA CCTGAGCTGG AACTGCGGCG GCGAGGGCCC CTCCGACGAC CCGGCAATCG AGGCGCTCCG CAACCGCCAG GTGAAGAACT TCCTGACGGT AACCCTCCTC GCCCTCGGCG CGCCGATGCT CCTCATGGGG GACGAGGTGC GCCGCACCCA GTGGGGAAAC AACAACGCTT ACTGCCAGGA CAATGAGACC GGCTGGTTCG ACTGGGGGCT GCTTGAGCAA CATAGCGACG TCCGCCGCTT CGTGCGTCTT TTGATTGACG CACGACTGAA GCGCGACCTG GCGGTTGAGG ACCCCGACCT GACCCTCAAC CAGCTCCTCC GCCAGGCACG GCTTGAGTGG CACGGCGTAA GGCTGGGGCG GCCCGACTGG GGAGATAACT CGCACAGCAT TGCCCTCACG ACCTGGAGCC TGACCGGCCG TTTCGTCTTC CATCTCATGG TCAACGCCTG GCGGGAGTCC CTCGCGTTTG AGCTCCCCCT GGTCCGTAAG CAGCCGGGAG TGGGCTGGCG CCGCTGGCTC GACACTTCCC TCGCATCTCC CGCCGACATC GTGCCGTTGG ACGAGACGCC GGCGGTCGAA GGAAAAACCT ATGAACTGCC GCCGCACTCG CTGGCTGTCA TGTTTGCCCG TGCTCCTGCG GGCGCAGGCT GA
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Protein sequence | MNSPIDSGTS SPLGATVFPG GVNFSIFSRD CTGVELHLFD RVDDARPSRT VTLHPKRNRT YHYWHTFVPG LGSGQLYGYR VAGPHDPRRG LRFDPYKLLI DPYGRAVAVP AGYSRRAVAE PGDNAAVAMK SVVADPRGYD WEGDIPLKRP FSRTVIYELH VAGFTRPPSS GVTEGKRGTY AGLVEKIPYL QELGVTAIEL LPVFQFDARD APEGFDNYWG YSPISFFAPH AAYSSRPDPL GPLDEFRDMV KALHRAGIEV ILDVVFNHTA EGDDRGPTLC YRGLANNFYY TLEPDGETYA NYSGCGNTLN ANNPIVRRLI SDSIHYWVRE MHVDGFRFDL ASILARDERG DLLENPPLLW DIETDPALAG IKLIAEAWDA AGLYQVGSFI GDSWKEWNGK FRDDVRSFLR GDAGTVTRFA SRLLASPDIY GHQEREPEQS INFVTCHDGF TLNDLVSYNR KHNEANGEEN RDGTDLNLSW NCGGEGPSDD PAIEALRNRQ VKNFLTVTLL ALGAPMLLMG DEVRRTQWGN NNAYCQDNET GWFDWGLLEQ HSDVRRFVRL LIDARLKRDL AVEDPDLTLN QLLRQARLEW HGVRLGRPDW GDNSHSIALT TWSLTGRFVF HLMVNAWRES LAFELPLVRK QPGVGWRRWL DTSLASPADI VPLDETPAVE GKTYELPPHS LAVMFARAPA GAG
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