Gene Gura_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_0378 
Symbol 
ID5165418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp445541 
End bp446809 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content52% 
IMG OID640547882 
Productdiguanylate cyclase 
Protein accessionYP_001229167 
Protein GI148262461 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000891935 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAC ATATATGGCC GAAGCCATTC AACTATTTCA GCAATGTAAA GCTTTTCCTC 
GTCAGCCTGT GCGTGATCCT CTCTCTCTTT GTAATTGCTG TCGCTTACTT TCTCTATTCC
AGAACCGATA GTCTTCTTTT ACTGCGTGTC AGGGAGCAAG CGGCTGCCTA TTCCGACCTG
ATAAATTACA GTAAACTGTG GAACTATGAC TATGGTGGCG TATATGTGGA GAAAAAAGCG
GGCGTGGATT CAAACACCTA CCTGAAAAAA CTCGGCATCA ATCCCGATGT GCGGGCTGAA
GGGGGGAGGA CCTTCACCAT GCGCAACCAC GCCATCATGA TAAAGGAAAT CTCCCTGCGG
AGCGAAAAGG AGGATGGCGT CAGGTTCCGC ATAACCAGCC TGAAGCCGAT CGATAAGGAC
AATGCCCCCG ATGCCATGGA GAGGGAGGCG CTTGGGCAGT TCGAAAAAGG GAAAAATGAG
GTGTATCACC TGGAGCGGCA AACGGACAAA GGCCCTCTGT TTCATTATCT GCGCCCCCTT
TATGCCGAGC AGTCATGTCT TGAATGTCAC AGATCGCAAG GATACAAAAT CGGCAGCGTT
ATGGGAGCAC TCAGTGTAAC CATTCCTGTC GTCACGCTCA TCAGGGAAAC GGACACCGAC
AAGCTGATGA TAGTGGCGGC GACGATAGGG ACCATCGGTC TTCTTCTGGG GATAACGTAT
TTTCTTACCT GGCGGCTCGT GCTTAATCTG GACATGGCAC AGAAGCACCT GAAGAGGCTT
GCGTCCACCG ATGAGCTGAC CGGTTTGAAA AATCGGCGCC AGATAATGAA ACGTTTGGAT
GAAGAGTATC AGCGTGCCAT TCGCCTGGGA GAACCGCTCT GCCTCATCAT GCTCGATCTT
GATCACTTCA AGAAGATCAA CGATACTTAT GGCCACCCTT TCGGCGATCT GGTGTTAAAA
TGCGTGGCGG GGCACATGAA AAAGGCCCTG CGCCGTTATG ATGTCCTTGG CAGGATTGGC
GGCGAGGAGT TTCTGATCGT GTCTCCCGGT ACGACACGCG AAGAGGCCGT TGTCCTGGCG
CAACGGCTGC GAAGCACTGT CGAGATGGAA AAGATAGCCT ATGAGGACAA AAAGGTAACC
ATCACCGTGA GTTGCGGCGT TGCGTTCTTA TATAAAGGAG ACGACAACGT CGAAATCCTT
CTCAAGCGGG CAGACTCCGC TCTCTACATA GCCAAGCAGG AGGGGAGAAA CCGGGTGGTG
GCCATCTAA
 
Protein sequence
MSTHIWPKPF NYFSNVKLFL VSLCVILSLF VIAVAYFLYS RTDSLLLLRV REQAAAYSDL 
INYSKLWNYD YGGVYVEKKA GVDSNTYLKK LGINPDVRAE GGRTFTMRNH AIMIKEISLR
SEKEDGVRFR ITSLKPIDKD NAPDAMEREA LGQFEKGKNE VYHLERQTDK GPLFHYLRPL
YAEQSCLECH RSQGYKIGSV MGALSVTIPV VTLIRETDTD KLMIVAATIG TIGLLLGITY
FLTWRLVLNL DMAQKHLKRL ASTDELTGLK NRRQIMKRLD EEYQRAIRLG EPLCLIMLDL
DHFKKINDTY GHPFGDLVLK CVAGHMKKAL RRYDVLGRIG GEEFLIVSPG TTREEAVVLA
QRLRSTVEME KIAYEDKKVT ITVSCGVAFL YKGDDNVEIL LKRADSALYI AKQEGRNRVV
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