Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0301 |
Symbol | |
ID | 5165970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 362694 |
End bp | 364205 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640547804 |
Product | ribonuclease |
Protein accession | YP_001229090 |
Protein GI | 148262384 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000158312 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTAACG AACTGGTCAT CAACACCACG TCCCACGAAA CCCGCATCGC CCTTATCGAG AACGGCACCA TTGCCGAACT CTATATTGAG CGGAGCCGGG TCAAGGGGAT CGTGGGCAAC ATTTACAAGG GTCGGGTCAT CAGGGTTCTG CCGGGGATGC AGGCCGCCTT TGTCGACATC GGCCTGGAGA AAGCGGCTTT CCTCTACGTT GCCGACGTCT TTGACGCCAT GGATGAGTAT GAATCGTTCA TGGATGGCAA CGGTAAGAAA GACGAGCCGG CAGAGGGGGA AGAGCCGGTG ATTCACCCCC TCCATCCCAT TGAGGAACTC CTCCAGGAAG GCCAGGAACT CCTGGTGCAG ATCTCGAAAG AGCCGATCGG CACCAAGGGC GCCCGCATCA CCGCCCATAT CTCCCTACCC GGCAGGCACC TGGTATATAT GCCGACCGTC GACCATGTGG GTATTTCCCG CCGCATCGAG GATGAAGCGG AGCGGGAGCG CCTCAAGGAG ATCGTTGACC GGATCAAGCC GCCAGGCGGT GGCTTCATCG TCCGTACCGT CTCGGAAGGG AAAAGCGAGG AAGATCTTGT TTCCGACCTC CATTACCTGA CCAAGCTCTG GGATGAGGTG GTGAAGCGCA AGGATAAGGC CAGCGCCCCG AGCCTGATCC ATTCCGACCT GGATGTCACC CAGAAGGTGG TGCGGGACAT CCTCACCGAG TCGGTGGAGC GGATCGTCGT CGACTTCAAG CCGGAATACG ACAGGATTGT CCAGTTCATC AGCACCTTCA TGCCGAAAAT GAAGTACTCC ATTGAGCTCT ACGACGAGGA GGAGCCGATC TTCGACCACT TCGGCCTTGA AGTGGAGATC AGCCGGGCGC TGGGGCGCAA GGTCTGGCTC AAATCGGGCG GTTACATCAT CATCGAGCAG ACCGAGGCGC TCACCGCCAT CGACGTCAAC ACCGGCCGTT TCGTCGGCAA GCACAACCTG GAAGACACCA TCCTCAAGAC CAACCTGGAG GCGGTGAAGG AGATCGCCTA TCAGTTGCGG CTGCGGAACC TGGGCGGCAT TATCATCATC GACTTCATCG ACATGGAGAA AGAGGTCAAT CGGGAAAAGG TCTTTACCGC CCTCGAAGAG GCGGTCAAGT CGGACAAGTC CAAGACCAAC ATCCTGAAGA TATCCGAGCT CGGCCTGGTG GAGATGACGA GAAAACGGGT CAGGGAGAGC ATCGGCCGGA TGATGTGCGA GCCGTGTCCG TACTGCGAAG GGCGGGGATA CGTCAAGTCG AAGACCACGG TCTGTCACGA AATATTCCGC GAGCTGCGAC GGGAGATGCT CGACATCCGC GGCAGCAAGA TCATGCTCAC GGTCCATCCC CAGGTCGCCG ACCTCCTCTA CGACGAGGAA CGGCGCGGAC TTGAGGAGCT GGAAAAGAAT TTCAAGAAAC GGATCACGGT CCGGGCCAAG CCGGGCTTTC ACCAGGAGCA GTTCGAGATC GCCATCAGTT AG
|
Protein sequence | MGNELVINTT SHETRIALIE NGTIAELYIE RSRVKGIVGN IYKGRVIRVL PGMQAAFVDI GLEKAAFLYV ADVFDAMDEY ESFMDGNGKK DEPAEGEEPV IHPLHPIEEL LQEGQELLVQ ISKEPIGTKG ARITAHISLP GRHLVYMPTV DHVGISRRIE DEAERERLKE IVDRIKPPGG GFIVRTVSEG KSEEDLVSDL HYLTKLWDEV VKRKDKASAP SLIHSDLDVT QKVVRDILTE SVERIVVDFK PEYDRIVQFI STFMPKMKYS IELYDEEEPI FDHFGLEVEI SRALGRKVWL KSGGYIIIEQ TEALTAIDVN TGRFVGKHNL EDTILKTNLE AVKEIAYQLR LRNLGGIIII DFIDMEKEVN REKVFTALEE AVKSDKSKTN ILKISELGLV EMTRKRVRES IGRMMCEPCP YCEGRGYVKS KTTVCHEIFR ELRREMLDIR GSKIMLTVHP QVADLLYDEE RRGLEELEKN FKKRITVRAK PGFHQEQFEI AIS
|
| |