| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0233 |
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| Symbol | |
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| ID | 5166054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 298305 |
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| End bp | 299558 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640547732 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001229022 |
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| Protein GI | 148262316 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.601671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCACT TTCAGTACAA GGGAAAAGAA CTCTATGCCG AAGACGTGGC GATCAAGGAT
ATCGTTGCCA AGGTCGGCAG CCCGGTCTAC ATCTATTCAC AGGCGACCCT GGAGCGCCAT
TTTAAGGCCA TGGACGAGGC ATTTGCCGCC GTTCCCCATA CCATCTGCTA TTCGGTCAAG
GCAAACTCCA ATCTGGCCGT TGTGAAAAAC TTCATCAACC TGGGTGGCGG CGTGGATATC
GTCTCCGGCG GCGAACTGTA CCGGGCGCTG AAAGCGGGGG TCGATCCGCA GAAGGTCGTT
TATTCGGGGG TCGGCAAAAA GGACGACGAG ATCGAATACG CCCTCAACAC CGGCATCCTC
ATGTTCAACG TGGAGTCTGA GCAGGAGCTG ACCCGCATAT CCGAGATCGC CAGCCGCATG
GGGAAAAAGG CGGGCATCGC CATCCGCGTC AATCCGGACG TAGATCCGCA GACCCATCCC
TACATCACCA CGGGGCTCAA GAACGCCAAG TTCGGCATCA CCATCGAGCG GGCCATAGAG
GAGTATCGCC GGGCCAAGGA CCTGCCGGGG ATCGAGATCC TCGGCATCGA CTGCCATATC
GGCAGCCAGC TGACCAAGGT CACTCCCTTC GTCGATGCCA TCAAGAAGCT GAAAAACGTC
ATCAACACCC TGAAGGGGAT GGGCATCAGC CTCAAGTACT TCGATCTCGG CGGCGGTCTC
GGCATCCAGT ACAACGATGA AGCTCCGCCG CTCCCCGCCG ACTACGGCAC GGAGATCCTC
GCCGAGACGA AAGACCTGGG CCTCCACCTG CTGTTCGAGC CGGGGCGGAA CCTGGTCGGC
AACGCCGGCA TCCTGGTAGC AACTTGCCTC TACACCAAGC AGCGGGACGA GAAGAACTTC
ATCATGATCG ATGCCGGCAT GAACGATCTG GCGCGGCCGG CCCTCTACGG CTCCTACCAC
GGGGTGAAGC CGGTGGTCAA TGACCAGGAC GGCGTGATCG TCGCCGATAT CGTCGGCCCG
ATCTGCGAGT CTGGCGACTT CCTCGCCAAG GACCGCGAAG TCCCCATGTT CAAGCAGGGG
GACATGATGG CCTTCATGTC TGCCGGTGCG TATGGTTTTG CCATGTCGAG CTCTTACAAC
AGCCGTCCCC GCGTAGCCGA GGTGATGGTG AAGGGGGACA GGTTCGAGGT GGTCCGCGAG
CGGGAGACGG TGGAAGACCT GATCAAAGGG GAAAAAGTCC CGGCATTTCT GTAA
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| Protein sequence | MHHFQYKGKE LYAEDVAIKD IVAKVGSPVY IYSQATLERH FKAMDEAFAA VPHTICYSVK
ANSNLAVVKN FINLGGGVDI VSGGELYRAL KAGVDPQKVV YSGVGKKDDE IEYALNTGIL
MFNVESEQEL TRISEIASRM GKKAGIAIRV NPDVDPQTHP YITTGLKNAK FGITIERAIE
EYRRAKDLPG IEILGIDCHI GSQLTKVTPF VDAIKKLKNV INTLKGMGIS LKYFDLGGGL
GIQYNDEAPP LPADYGTEIL AETKDLGLHL LFEPGRNLVG NAGILVATCL YTKQRDEKNF
IMIDAGMNDL ARPALYGSYH GVKPVVNDQD GVIVADIVGP ICESGDFLAK DREVPMFKQG
DMMAFMSAGA YGFAMSSSYN SRPRVAEVMV KGDRFEVVRE RETVEDLIKG EKVPAFL
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