| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0165 |
|---|
| Symbol | |
|---|
| ID | 5165433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 227809 |
|---|
| End bp | 229515 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640547664 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001228954 |
|---|
| Protein GI | 148262248 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA ACCTGAAACT CGGTTCCCGT TTCATCCGGT TTTGTCTCAT CAGCGGATTC
ATCATCGCCG TAACCGGTGT TTATTTTGCG CGCACCATTT ACGCAGATCC GACGACCAGT
TCCATCATGC AAAGCAACGC CAACCTTGCT GCTATCGCCT TTGCCCTGAA TGCCCTGATA
GCGCTGGTAG TCTTCTGGAT GCTGACCGCC AGGAAAATGG TGCAGCGTGT GCAGATCCTG
GCTGCTGCCA TGAACCGGGG GGCCGAGGGG GACCTTACGG CAAAGGTGGA GGTTGATTCC
GTTGACGAAC TCGGCATGCT CGGCGGCACC TTCAACGGCA TGCTGGAAAA GCTGGCGGGC
ATGGCCGAAA GGGTCAATGT TTCGATCCGT GAGCTGCGGC GCATCTCCGG TGATATCAAG
GAGGTATCCC AGCGTGGGGT TTCTGTTGCG GAGATCCAGT CCGAAGGGGT AAAGGGGACG
TCGGGTGCCG TACAGGAGAT AAACGCCTCG GTGAACGGAG TTGCCAGGGC AGTGGAAAGC
CTGTCCCGCT CTTCAGCCGA AAACTCTTCA TCCATTCTGG AGATGTCCGC CAGCATCGAA
GAGGTGATAA AGCACGTTGA AGCACTGGCC AATGCGGTTG AGGAGGTCAG TACCTCCATC
AGCGAAATGG CGGCGGCGGA AAAACAGATC GGCGCCAGCG TAAACAATCT CATGGCCGAT
TCCACCACTA CGGCCAAGCT GGTTGCGGAG ATGGACGGTT CCATCAAGCA GGTGGAGCGG
AATGCCTTGA ATACGGCCAC TATCTCGGAA GAGGTGCGCA ACGATGCGGA ATCGGGACGG
GTGTCCGTTG AGGCGACCAT ATCCGGTATC GGTGAAATCC GCCGCTCTTC CCGCATTACT
TTTGAAGCGA TACAAAACCT CTCCCTGCGT GCCGGCAACA TCGGGAAAAT CATTCTCGTC
ATAGATGAAC TGGCCGAACA GACCAACCTT CTCGCCCTGA ATGCGTCTAT AATCGCCGCC
CAGGCTGGTG AGCACGGTAA GGGCTTTGCT GTGGTGGCTG AGGAAATTAA GGAACTGGCA
AGACGGACCG GCAATTCAAC CAGGGAGATA ACGGATATCA TCAAGGGTGT GCAGGAAGAG
ACCCAGCGGG CCGTCAAAGC GATCAATCTG TCGGAACAGC GGATTGTCGA AGGCGAACAA
TTATCGCAAC GATCCGGAGA GGCGTTGAAC AAGATAGTTG CCGGTGTCCA GATGGCTACC
GACCAGGTAA GTCAGATCGC CCGGACTACC GTCGAGCAGG CCCAGGGGAG CCAGGAGATA
AGCAGGGCCA TGGAACGCGT TGCGGATATG GTCAAGCAGA TAGCCAAGGC CACCCGGGAG
CAGGGACACG GGAGTGAACT CATCATGTCG GCAGTGGAAA GGATGAAGGG TCTGACCAGC
CAGGTGAGGT CCTCCACCTT GGAGCAGAGC AGCTCAAGTA ATTTGATCGT CCGTTCCACC
GAGGACATTA CCACCATGAT AATGAATATC AGGCAGGCCT GCACGGTACA GACAGAGAGC
AGCCGACAGA TTGTCGCGGC CATTGAACAC ATTCAGCAGT CAACCAAAAC CAACGTAGAG
TCCACCCGGG TGATGGACGG CGCCATGGCC GGTCTTTCCC GCCAAATCGA AGTTCTCAGC
AACGAGATGT CCGACTTCAA GGTTTGA
|
|---|
| Protein sequence | MAKNLKLGSR FIRFCLISGF IIAVTGVYFA RTIYADPTTS SIMQSNANLA AIAFALNALI
ALVVFWMLTA RKMVQRVQIL AAAMNRGAEG DLTAKVEVDS VDELGMLGGT FNGMLEKLAG
MAERVNVSIR ELRRISGDIK EVSQRGVSVA EIQSEGVKGT SGAVQEINAS VNGVARAVES
LSRSSAENSS SILEMSASIE EVIKHVEALA NAVEEVSTSI SEMAAAEKQI GASVNNLMAD
STTTAKLVAE MDGSIKQVER NALNTATISE EVRNDAESGR VSVEATISGI GEIRRSSRIT
FEAIQNLSLR AGNIGKIILV IDELAEQTNL LALNASIIAA QAGEHGKGFA VVAEEIKELA
RRTGNSTREI TDIIKGVQEE TQRAVKAINL SEQRIVEGEQ LSQRSGEALN KIVAGVQMAT
DQVSQIARTT VEQAQGSQEI SRAMERVADM VKQIAKATRE QGHGSELIMS AVERMKGLTS
QVRSSTLEQS SSSNLIVRST EDITTMIMNI RQACTVQTES SRQIVAAIEH IQQSTKTNVE
STRVMDGAMA GLSRQIEVLS NEMSDFKV
|
|---|
| |