| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0131 |
|---|
| Symbol | |
|---|
| ID | 5162783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 184480 |
|---|
| End bp | 186123 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640547630 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_001228920 |
|---|
| Protein GI | 148262214 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000220266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG GAAAAGATAC GATACTAAAA CTGGTTCGGC CCAACAGCGA ACCGGCACGT
GGAAGCGCTG TTCTTGCTGA CCTCTACAAG GCCTTGAAGG CCATCGGATT TTATCCCCAC
GACCATCCCC TGCGAGAAGA AATTCTCCGG ACAGCCCATA AATCCCTTCA GTCTCTCCTC
GCTGAGAAGG AACTGCTGCT CGTCATTACC CGTTCCGGTT TTTCGTCCAT CGATGGCGAC
GCGTTTGTTG ACAGTAATCA GATGGTCAGG GCACTGGCCG GAGAATTATT CGTTCGCAGG
ATTCAACGGC TTACGTTGCT CAATGACCTT ACCCTTAAAG ACCTTCGCTC CTTTCTCCAG
CTATTGGCAT TGGATCCGCA AAAACTGGCT TCTTCCGGCG GTATGGCTCA GGAGATGATA
ACGCAAGGTA TCAGGACCAT CTGGGCAAAC GAACTCGATC TCTCGGTGAT ATGGGAAAAA
CGGCAGTCAA TGGATGAAGG CGTTGTTGCT CTGGCCGGTG CAGATGAGGA TGCCGGCAAG
GGGGACGCCG AGCTTCAGGC CGGAACCGAT GCAATAGAGG AATCCGGCTA TCCGTCGGAT
TGTCTCCCGA CTGAAGAAGC CGAGTTGGCG TTGGAAGATC TGATTGCCCG TATGGATGAC
GAGCCGAACG ATAATCGTTA CCAGCAACTA GCCAGGTTGC TCGTTGTTCA GGCGGAAAAA
CTCAAGGAAA GGGCGATTTG CGGGCCTCTG CTGCCGGTTA TAGAGGCGCT CATGCGGCAT
AGCGACGATG GCGGCAGGAG TGCCGTAAAG AAGGAATACG CTGTATTTAC CTTGGAACAG
ATAGCCGACG GGATAATGAC GGATTTTCTT CTCCAGCAGC TTGAAATCAT GAGTTCCATA
GAAAAGGAAA GAATTTATGC TGTGCTCGGG CGGTTGGGCG CAAAGGTAGC ATACGGGATC
ATTCAGAGGC TCTGTCTAAC GGATGGGCTA CTTGCGCGAA AGTCTTTAGC GGCTGCGCTG
TTGCGGATCG GTCCGCCGGC AGTCCCTCCG CTCCTGGCCA TGCTGAAAGA CGAACGCTGG
TACGTAGTTC GCAACATGGT TGCCATTATT GGCGAAATAG GGTGCAGGAA TTCGGTGTAT
GCGTTGCGAC CGGCTGTCAA TCATGAAGAC CCGCGGGTGA GGAAGGAAGC CATCCGGGCT
CTTGTAAAAA CTGGCGGTAA AGATGCCGAA TCCATCCTTA TCGACTTGCT GGACGATGAT
GATGAGTCTA TAGTCCGGCA TGCCATCATG TCATTGGGCA TTCTTAAAAG TACGACGGCG
ATTCTGTCGC TGATAAGTAT TACGAAGAAA CGGGACATCT TCACGAAGCG CCTTGCCATG
AAAAAAGATG CCATCCAGGC CCTTGGCCGG ATAGGCGATA AGCGTGCGAC ACCGCATCTT
TTGACGGTGC TTGAGGCGCA TTGCTGGTTG CCCTGGAACA GATGGGACGA TTTGAAGGTT
GTGGCTGCGA CAGCCTTGGG ACAATTGGGT GATGAAGCGG CTCTGCCGGT ATTGAAGTCA
AACGCATCCC GTGGCGGACG TCTTGGTAGG GCATGCAGCG AAGCGGTGGA TAATATTGAA
AGGGTGGCGG AAGGGATTGA ATGA
|
|---|
| Protein sequence | MSAGKDTILK LVRPNSEPAR GSAVLADLYK ALKAIGFYPH DHPLREEILR TAHKSLQSLL
AEKELLLVIT RSGFSSIDGD AFVDSNQMVR ALAGELFVRR IQRLTLLNDL TLKDLRSFLQ
LLALDPQKLA SSGGMAQEMI TQGIRTIWAN ELDLSVIWEK RQSMDEGVVA LAGADEDAGK
GDAELQAGTD AIEESGYPSD CLPTEEAELA LEDLIARMDD EPNDNRYQQL ARLLVVQAEK
LKERAICGPL LPVIEALMRH SDDGGRSAVK KEYAVFTLEQ IADGIMTDFL LQQLEIMSSI
EKERIYAVLG RLGAKVAYGI IQRLCLTDGL LARKSLAAAL LRIGPPAVPP LLAMLKDERW
YVVRNMVAII GEIGCRNSVY ALRPAVNHED PRVRKEAIRA LVKTGGKDAE SILIDLLDDD
DESIVRHAIM SLGILKSTTA ILSLISITKK RDIFTKRLAM KKDAIQALGR IGDKRATPHL
LTVLEAHCWL PWNRWDDLKV VAATALGQLG DEAALPVLKS NASRGGRLGR ACSEAVDNIE
RVAEGIE
|
|---|
| |