| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0050 |
|---|
| Symbol | |
|---|
| ID | 5164897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 57841 |
|---|
| End bp | 59163 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640547549 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor |
|---|
| Protein accession | YP_001228841 |
|---|
| Protein GI | 148262135 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGCAG TAACTTCAGC GCACATTCTT TACATGGAAG ACGATGCAGG GTTGGCCAGG
CTGTTACAGA AGAGTTTGCA GCGGCTGGGC CACAGTGTCG ACATTGCCGA TAACGGCGAG
GCTGGTTTGG CGATGGTGGC AAAGGGGCGC TACGACCTTG TGCTGGTCGA TTACAACATG
CCGGTCTGCG GCGGGATGGA TGTGCTCCGC TTCATGACGG CAAAGAGAGG TCTCCCGCCG
GTCATCATGG TGACCGGCAA CGGTAATGAA AGGGTCGCCG TAGAGGCGCT GAAGCTGGGG
GCTACCGATT ATATCGTAAA AGATGTGGAT ATGGGCTACC TGGAACTGTT GCCGATAATC
ATCGGACAGG TGCTGGAGAA GGAGCAGCTT ATCCGGGAAA GGGAGCAGAT GTTCCTTGCC
GTTCAGGAGA GCGAGGAGAG GTATCGAAAG CTCGTTGAAC TTTCACCGGA CGGGATTGCC
ATCCACCAGG AGGGGCGGTT TGTGTTCGTC AATCCGACGG GAATGGAGAT TCTCGGGGTC
AGAGAAAGTG AGGAATTGCT CGGGAGGGAG ATCCTTGAAT TTGTTCACCC GAACTTTCAT
CAGGCAGTTC GGGAAAGGGT CGAGCTACTG GCCAAGAGCG GCAAGGAACT GCCGCTCACC
GAAGAGAAAT TCCTCCGTCT GGACGGGACG GAGGTCGATG TGGAGGTTGT CACGCTCCCG
TTTACCTTCA ATGGGGAACC GGCATGCCAG GCGATCTTCC GCGACATCAC CGAGCGGAAA
CTGGCCAAGG AACGGCTTGA ATATATGGCT AATTTCGATG CTTTGACCGC CCTCCCCAAC
CGCACGCTGT TTTTTGACCG TCTCGGTCAG GTACTGTTCC GTGCCAAACG GTATCAGGAG
CTGTTTGCAC TGCTGTTTCT CGACCTGGAC CGGTTCAAGC AGGTCAATGA TACATTCGGC
CACGATATCG GGGACAGGCT GCTCGGAGAA GTCGCCGACA GGCTGATCGC CTGTCTGCGC
GAGTCGGATA CGGTGGCAAG GATGGGCGGT GACGAATTCA CCGTCATCCT GTCCAGAATT
GCCGATATGC AGGACGCTGA ATCGGTTGCC TGCAAGATCA TAACGACCCT GGCCGCGCCG
TTTTGCTTGC AAGGGCATGA GTGTACTATC GGCGCCAGTA TCGGTATCAG TATTTTTCCC
TGCGACAGCC TTGACCCGGA ATCGCTCCTG AAAATGGCCG ATACCGCCAT GTATCAGGCC
AAGGAGAACG GTCGCAATAC CTTCAGTTTT TACAGCGACG GTCTGCAGCC GGTTGCTTGC
TGA
|
|---|
| Protein sequence | MAAVTSAHIL YMEDDAGLAR LLQKSLQRLG HSVDIADNGE AGLAMVAKGR YDLVLVDYNM
PVCGGMDVLR FMTAKRGLPP VIMVTGNGNE RVAVEALKLG ATDYIVKDVD MGYLELLPII
IGQVLEKEQL IREREQMFLA VQESEERYRK LVELSPDGIA IHQEGRFVFV NPTGMEILGV
RESEELLGRE ILEFVHPNFH QAVRERVELL AKSGKELPLT EEKFLRLDGT EVDVEVVTLP
FTFNGEPACQ AIFRDITERK LAKERLEYMA NFDALTALPN RTLFFDRLGQ VLFRAKRYQE
LFALLFLDLD RFKQVNDTFG HDIGDRLLGE VADRLIACLR ESDTVARMGG DEFTVILSRI
ADMQDAESVA CKIITTLAAP FCLQGHECTI GASIGISIFP CDSLDPESLL KMADTAMYQA
KENGRNTFSF YSDGLQPVAC
|
|---|
| |