| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0024 |
|---|
| Symbol | |
|---|
| ID | 5166085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 31893 |
|---|
| End bp | 34271 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640547523 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_001228815 |
|---|
| Protein GI | 148262109 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000675639 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAA CAATAATCAG CAAAACCATG AAAAAGCCTG AACTCCTCTC CCCGGCCGGG
TCGCTGGAGG CCTTCTTTGC CGCCATGGAA AAGGGGGCGG ATGCCGTCTA TGCGGGCCTG
CACGATTTTT CCGCCCGGGC TAAGGCGAAG AACTTCTCCC TCGCCCAGAT GGAGCGGATG
CTCGCCTACG CCCACTGCCA GGGAAGAAAG CTATACGTCA CCATCAACAC CCTGATCAAG
GAGAACGAGC TGCCGCAGCT GGTGGACCTG CTCGCCGCCC TGGAGGGGAT GCGGGTCGAC
GGGGTGATCC TCCAGGACAT GGCAACGGCC CGGCTGATCC GTGAACATTT CCCCGGTATC
CCGCTCCACG CCTCGACCCA GATGACCATC CACAATTCGC TCGGCGTCAA ACAACTGGAG
GAGCTCGGCT TCGAGCGGGT GGTGCTGGCC CGCGAGCTGC ACATCGACGA GATCAAGGCC
ATCGTTGCCG CATCCCGGGC CGAGATCGAG TGTTTCATCC ATGGCGCCCT CTGCTTCTCC
TTCTCCGGGC AATGCTATTT CTCCTCGTTT CTCGGCGGCC ACAGCGGCAA CCGGGGGCGT
TGCGCCCAGC CCTGTCGCAG GCAGTACACC TACCGGGGCA AGGAAGGGTA CTACTTCTCC
ACCAACGATT TTTCCAGCAT CGACATGATC CCGCAGCTGA TCGAAGCAAA GGTTGCCTCG
CTGAAGATCG AGGGGCGGAT GAAGTCCGCC GAGTACGTGG CGAGCGTGGT GGGGGCCTAC
CGGTTGGTAC TGGATGCCCC GGAAGGCAAG CGCAGCGAGG CAGTGGCCGA GGCCAAGGAA
CTCCTGAAGC TCTCCTTCGG CCGGGTGCCG ACCAAGGGGT TCCTCGCCTC CCACACACCG
ACCGACATCG CCACCCCGTC GCTCAAAGGG GCGACCGGCC GCTTTCTCGG AACGATAAAG
TCCCTGAACG GCAACCGGAT CACCTTTGAA ACCAAGGATC GGCTCCATGT GGGGGACCGG
GTGCGGGTGC AGCCGAAGAG CGACATGGCC GGCCGGGCCT TTACCATCAA GGAACTCTAT
CTGGGGAAAC AGCAGGTGAA GGGGGCAAAG GAAAAATCCC TGGTCACTAC CTCGTCACCA
TTCCCCTTCA AGGTAGGGGA CGCCGTCTTC AAGGTCTCCT CGGAAACCGC CTTCACCATG
AGCGAGAACG CCTGCGCAAA AAAGCTGGAT ACGGTAAAGG GAGACAAGCT CCCCTGCGAG
CTGAGCCTCG CCCTGATCGG CGAGACCATG CGCATCACGG CTCAAGTGGC AGGAAAGGAA
GTATGCCGGG AATTTCACTT GGGCCTTCTC GAACCGGCGC GCACCACAGA CATGGAAAGT
GTGCTTGCCG CCCAGTTCGG CCGGACCGGC GACACTGCCT TCATCCTCAG CGCGCTGAAT
GCGCCCGATT TTCCGGCGGT GCTGATTCCT GCCGCCCAGC TCAAGGAGAT CCGCCGCGAA
TTCTACCGCT GGCTTGGCGA CAAGGCGCTC GGCGAGATAA AGGAACGGAG CCGGGAACAC
AGGAAATCGG CCCTGGCAGC GCTCGTCGGC AGCCGCCCCG TCAAGGGACC CCAGCGGGAA
GAACTGGCGG TGAGGCTCGA ACATCTCCGC GATTACCACC TGCTCCATCA GGAGAGCATC
GACAGCATCA TCCTGCCGGT GTCAAAGGCC AACATGCACC AGATCCCGCT CTTCGTGCGC
AAGCTGAAGG GGCGCGAACA GCAGGTAATC TGGCATCTGC CGTTCATCAT CTTCGAGGCG
GAGATCCCCT TCTTCAGGGA GGCCGTCTCC GTTCTCATGC ATTACGGTTT CCGGCGCTTC
GAGGCAGCCA ATCTCTCTCA CTTCGGGCTA CTCAAGGGGC TTGACGTAGA ACTCTCCACC
GATTACCGGC TCTTTTCCCT CAACAGCCAG GCGCTCCTCT GCTGGCAGGA GCTGGGAGCA
ACCGCCGCCA CCCTTTATAT CGAGGACGAC TCCGACAACA TAGCGGCGCT CCTGGCGGCA
GACCTGCCGA TCAAAAGACG GATCATGGTC TATTCCGCGG TACCGGCCAT CACCACGAAG
ATCAGGATCA AGGACGTGCG CAGCGACGTG CCGGTGCTCT CCGACCGGGG CGAAGGCTAC
CGGATCACGA CCAGGGACGG ACTCACCGTG GTCACCCCCA ACGCGATGTT TTCCCTGACC
GCCTTTAAGG GGAGGCTCAA GGAAATGGGG GGCACCTCAT ATGTCATGGA TCTCTCCCAG
CTACCGCCGG ACGAGTGGGG GAGGGTACTG GGCGCGTTCA GCCGGGGCAC GGCATTACCG
GGAACGTCGG AGTTCAATTT CACGATGGGA TTGGTTTGA
|
|---|
| Protein sequence | MSKTIISKTM KKPELLSPAG SLEAFFAAME KGADAVYAGL HDFSARAKAK NFSLAQMERM
LAYAHCQGRK LYVTINTLIK ENELPQLVDL LAALEGMRVD GVILQDMATA RLIREHFPGI
PLHASTQMTI HNSLGVKQLE ELGFERVVLA RELHIDEIKA IVAASRAEIE CFIHGALCFS
FSGQCYFSSF LGGHSGNRGR CAQPCRRQYT YRGKEGYYFS TNDFSSIDMI PQLIEAKVAS
LKIEGRMKSA EYVASVVGAY RLVLDAPEGK RSEAVAEAKE LLKLSFGRVP TKGFLASHTP
TDIATPSLKG ATGRFLGTIK SLNGNRITFE TKDRLHVGDR VRVQPKSDMA GRAFTIKELY
LGKQQVKGAK EKSLVTTSSP FPFKVGDAVF KVSSETAFTM SENACAKKLD TVKGDKLPCE
LSLALIGETM RITAQVAGKE VCREFHLGLL EPARTTDMES VLAAQFGRTG DTAFILSALN
APDFPAVLIP AAQLKEIRRE FYRWLGDKAL GEIKERSREH RKSALAALVG SRPVKGPQRE
ELAVRLEHLR DYHLLHQESI DSIILPVSKA NMHQIPLFVR KLKGREQQVI WHLPFIIFEA
EIPFFREAVS VLMHYGFRRF EAANLSHFGL LKGLDVELST DYRLFSLNSQ ALLCWQELGA
TAATLYIEDD SDNIAALLAA DLPIKRRIMV YSAVPAITTK IRIKDVRSDV PVLSDRGEGY
RITTRDGLTV VTPNAMFSLT AFKGRLKEMG GTSYVMDLSQ LPPDEWGRVL GAFSRGTALP
GTSEFNFTMG LV
|
|---|
| |