Gene Gura_0015 details

Gene Information

• Locus tag: Gura_0015
• Symbol: hemE
• ID: 5164073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 22609
• End bp: 23628
• Gene Length: 1020 bp
• Protein Length: 339 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640547514
• Product: uroporphyrinogen decarboxylase
• Protein accession: YP_001228806
• Protein GI: 148262100
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0407] Uroporphyrinogen-III decarboxylase
• TIGRFAM ID: [TIGR01463] methyltransferase, MtaA/CmuA family; [TIGR01464] uroporphyrinogen decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00367491
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACAC GTTTTCTCGA CGCCTGCTGG GGCAAGCCCG TTGACCGGAC ACCCGTGTGG 
CTGATGCGCC AGGCCGGCCG TTACCTGCCA GATTACATGC GGGTCCGCAG CAAATGCACC 
TTTCTGGAGC TGTGCAAGAC CCCGGAGCTG GCCGCTGAAG TGTCCATCCA GCCGGTGGAT 
ATCCTGGGCG TTGACGCTGC CATTCTCTTT TCCGACATCC TCACCCCGGT CGAGCCGATG 
GGCATGGCCC TCGACTTCGT CCCCGGTCCG GTCTTCGAGC ACCCGATCCG CACCATGGCC 
GATGTGGAAA AACTTCGCAT TCCGCAGATG GAGCAGGACG TTCCATATGT GCTGGAAACC 
ATCAAGATTC TCCGTCGTGA GCTGGCCAAC AAGGTGCCGC TCATCGGCTT TGGTGGCGCT 
CCCTTTACCC TCGCCTGCTA CATGGTGGAG GGGAAGGGCT CCAAGGATTG GGCGACCATG 
AAGCGGATGA TGTACGCAGC CCCCGAGGTG TACGCGGCCC TCATGGAGAA GGTGACCATG 
ATGGACATGG AGTACCTGAA CGCCCAGATC AAGGCCGGTG CCCAGGCGAT CCAGATCTTC 
GACACCTGGG GCGGTGTTCT CGCCCCCAGC GACTACGAGA AATACGTCCT CCCCTATACC 
ACCAAGCTGA TCAACGGCCT CAACCGGCAG AACGTTCCCG TCATTCACTT CGTCAAGGGT 
GCCGGCACCA TGCTCGACAG CGTGAAAAGG GCTGGCGGAG ACGTGATGGG ACTCGACTGG 
CACATCAACC TGGGAAAAGC GAGGGAAGTG CTCGGCGACA TGGCCGTCCA GGGGAACCTG 
GATCCGACCG TGCTCTTCGC ACCGAAGGAT GTGATCGAGC AGGAGGTAAA AAGGGTGCTC 
GACGAGAACG CCGGGAAACC GGGACACATC TTCAACCTCG GGCACGGCAT CCTTCCCACG 
GTGCCGCCGG AGAATGCGAT CCACATGGTC GAATGCGTGC ACCGGTTGTC GCAGAAGTAA 

 

Protein sequence

MNTRFLDACW GKPVDRTPVW LMRQAGRYLP DYMRVRSKCT FLELCKTPEL AAEVSIQPVD 
ILGVDAAILF SDILTPVEPM GMALDFVPGP VFEHPIRTMA DVEKLRIPQM EQDVPYVLET 
IKILRRELAN KVPLIGFGGA PFTLACYMVE GKGSKDWATM KRMMYAAPEV YAALMEKVTM 
MDMEYLNAQI KAGAQAIQIF DTWGGVLAPS DYEKYVLPYT TKLINGLNRQ NVPVIHFVKG 
AGTMLDSVKR AGGDVMGLDW HINLGKAREV LGDMAVQGNL DPTVLFAPKD VIEQEVKRVL 
DENAGKPGHI FNLGHGILPT VPPENAIHMV ECVHRLSQK