| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0252 |
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| Symbol | avhB6 |
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| ID | 5148752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 185042 |
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| End bp | 186028 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640539129 |
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| Product | Type IV secretory pathway AvhB6 protein |
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| Protein accession | YP_001220562 |
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| Protein GI | 148241061 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATAA ACGTCTTTGA CAGCTTTCTG AAGGAGTTCG AACAGCCGAT CACGACATTC
GTGTCGACCT CGGTATCGAA TCTTGCCTCC TACATTGATG GTCCGCTGCG CACGGCCGTG
ATGCTCTATG TCATCCTCTA CGGTTTTGCG GTGATGCGGG GCGCGATCTC CGAGCCCATC
ATGGAGTTTG CCTGGCGGGC GATGCGGATC GTGGTCGTCG TGCTGCTAGC GACCAATTCA
AGCGCGTTCC AGCAATACGT CACGGGACTG TTCTTCGATT CGCTGCCGAA GGAGATTGGC
AATGCATTGG CTGGTGCCGG ACTGAATACC AATTCCGGAG TTCCGTTCGA TCAGCTTCTG
ACCAAAGGAA TTGACGTCGC AAATAGGATC TACAAGCAAG CCGGACTGAC CAACATCGCG
CCCGCACTGA TTGCCGCGAT TCTCCTAGTC TTCGTGGCGG TTGGCTCCTT CTTGCAGTTT
GCCATCCTGC TCTATGCCAA GGTTGGTCTG GGGGTCGTGA TCGCGCTTGG GCCGCTCTTC
ATTGCACTTG GACTATTCGA GGCCACGCGG CCCTTTACGG AAGCCTGGCT TCGGCAGGTC
GCGAATTTCG TGATCCTGCT GGTGCTGGTG GTCGCACTGG TCGGGCTGAT GTTGACGACC
GTTAGCGGCT TCATCGACAG GTTCGCGGCA AACGCCGGCA CGGCCGGCGA GATGGTGGTG
GCCGCGGTCG CCATCAGCGC GGTGCTCGGT CTGTCCGGAT ACATCGCGCT TCAACTGCCG
ATCATCGCAG GAGGTCTCGC CGGGGGTGGC GCTTCGCTCG CCAGCCGGCT GGTCACGAGC
CCAATGATTG CCAATGCCAC GGCGGCAGCC AGTGGCGCAT ATGCCGGCGC CCGCTGGTCG
GCCAGCCGCG GTCTCGCCGC GGTGAGAGCC AGCCGGCAGG GCGGCAGTAT GCGCCGCACC
CAATCGCCGG GGACCACGGC GGCGTAG
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| Protein sequence | MAINVFDSFL KEFEQPITTF VSTSVSNLAS YIDGPLRTAV MLYVILYGFA VMRGAISEPI
MEFAWRAMRI VVVVLLATNS SAFQQYVTGL FFDSLPKEIG NALAGAGLNT NSGVPFDQLL
TKGIDVANRI YKQAGLTNIA PALIAAILLV FVAVGSFLQF AILLYAKVGL GVVIALGPLF
IALGLFEATR PFTEAWLRQV ANFVILLVLV VALVGLMLTT VSGFIDRFAA NAGTAGEMVV
AAVAISAVLG LSGYIALQLP IIAGGLAGGG ASLASRLVTS PMIANATAAA SGAYAGARWS
ASRGLAAVRA SRQGGSMRRT QSPGTTAA
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