| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0249 |
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| Symbol | avhB10 |
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| ID | 5148556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 182015 |
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| End bp | 183160 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640539125 |
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| Product | Type IV secretory pathway AvhB10 protein |
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| Protein accession | YP_001220558 |
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| Protein GI | 148241057 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.77314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC ATCACGATGA GACGATCGCC GGCGACCGTG GCATTACGCC CGTTGGAGGA
GGCGACAATG CTCGAGCGAC GATGCTCAAA CGCGGCTTCG GAGCGCTGGC GCTCACCGCA
TTTGCCGCTC TGATCATCTG GGGGACTTGG AAAGGTGATA AGCCAGTTAG CGATTCCGCC
CGCAAGCTCG TGATCCGCCA AGCGGCCGCG TTCGAGCCCA TCCCGGAAGC GCCGGCCGCA
CCAATCACCA CATCCTCTAT TGGAGCCGCG CCGGTCGCAG CCACACCAGC TGCACCCGCG
CCCGCCTCCG ACCAGCTTCT GGAAAGCGCC CGTCGCGCAC CAGTGCTGGC ATACAATCGG
CCGAGTTCTG CGGGACATGC AGCCCACGAC AGCGTGACCG GAAGTGTCGC CTCTGATCCC
TATGGGTTTT GGCGGGGCGA GCCGCGCAAC GACCTTGCCG ATAAGCTGAA ACCCACGCCG
ATCGAGGGCG TTCGCGCTGC GCGGCTGCCC AACCGCAATC TGCTCATCAC CCAGGGTACC
TCGATCCCGT GCGTGCTGGA GACGGCGATG TCCTCGGACG TGGCGGGCTT CGTCTCCTGC
GTCGTTATCC GAGACGTTAT GTCGGATTCC GGCAACGTCG TACTGATGGA AAAGGGCACA
CAGGTCGTGG GCGAATATCG CGGTAATGTG CGGCGCGGCT CAAAACGCCT TTTCGTGCTG
TGGACCCGCG CAAAGACGCC GACAGGCGTG ATCGCGGCCC TGGCCTCGCC CGCCACGGAT
GCGCTGGGCC GCGCTGGCTT CGACGGCGAC ATCGACACCC ACTTCTTTGA ACGCTTCGGC
TCGGCGCTGC TGCTGTCCAT CGTTGGCGAT GCCTCCTCAA TCGGGCGTCA GCAGCTGCAG
GACAGCTCGA TCCAGATCAA CAACACCACG GGAGCGACCA ACACCGCCGC CGGCATCGCC
GTCGAGCAGT CGATCAACAT TCCACCGACT CTGAACAAGA ATCAGGGCGA GCTCGTCAAT
ATCTTTGTCG CGCGCGATGT TGATTTCTCC TCGGTCTATC AATTGCGCCG GATCGAGACC
CGCACGCAGA TTTTGGACCG CACCATTCCC GGAGGCCTCG TGGCGCCGGC GGTGGTGACA
AAGTGA
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| Protein sequence | MTEHHDETIA GDRGITPVGG GDNARATMLK RGFGALALTA FAALIIWGTW KGDKPVSDSA
RKLVIRQAAA FEPIPEAPAA PITTSSIGAA PVAATPAAPA PASDQLLESA RRAPVLAYNR
PSSAGHAAHD SVTGSVASDP YGFWRGEPRN DLADKLKPTP IEGVRAARLP NRNLLITQGT
SIPCVLETAM SSDVAGFVSC VVIRDVMSDS GNVVLMEKGT QVVGEYRGNV RRGSKRLFVL
WTRAKTPTGV IAALASPATD ALGRAGFDGD IDTHFFERFG SALLLSIVGD ASSIGRQQLQ
DSSIQINNTT GATNTAAGIA VEQSINIPPT LNKNQGELVN IFVARDVDFS SVYQLRRIET
RTQILDRTIP GGLVAPAVVT K
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