| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0233 |
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| Symbol | |
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| ID | 5148517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | + |
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| Start bp | 171579 |
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| End bp | 172844 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640539113 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001220546 |
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| Protein GI | 148241045 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.683027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCT GTATTCGAAC ACTTTCTGTT GTTTGCGCCG CGACGCTCGT CTTCGCAATG
ACAGCAGCAG CTTCTGCAAC CGATACTTCG GAGGTCGCGC GAGCCGCCTT TCAGGCCAAA
GATCGCGGAC AGCTCCTGAT GGCGATCGGC TTGTTCAACC AGGCCATGAA GGACGAGCAA
CTTTCGAAGA AGCAACGCGG CTTGCTGCTG TTCGGCCGTG GCACCGCCTA TCAGCAGCTC
GGGATAACAG AGGCCGCTCT CACCGATCTG GACGGGGTGG TCGCGCTGCT ACCTGATTTT
CCTGGCGGCT ACGCCTATCG CGCCGTGATC TGGATCGCTG AGCGGCGATA CGGAGAGGCG
CTCATGGATT TGCAGCAAGC CCATCAGCTT GCTCCGAACG ATGCGAGCGT GCTTCTGAAT
CTCGGCAACC TCTACGCTCA AACGGGCAGG CTTGAGCTTG CAATTGAGAA CTATGGCCAG
GCGATCGGGC TCCGTCCGGA TTTCGACAAG GCCTACTTCG ATCGGGCGGG CGCTTACATG
GTTAAGCACG ATTTCGCACG CGCGATGGCG GATTTCGACA AGGCGATCGA GCTTCGCCCC
ACATTTGCTG ATGCCATCGC CAATCGCGGG GCGCTGCATC TGGCGAACGG AAATGTCGAA
GCAGCTCTTT CCGACCTGAA CGCCGCCCTT GAGCTCGCGC CGCGCAACGC GCGATATTAT
GACGCCCGTG CCAATGCCTA TCTGGTTGAG GCCCGCTACG GCGATGCGCT TGCCGACTTC
GATGAAGCCT TGCAGATCGA TCCTGGCAAT CCCGCGCTGT ATTTCGGACG TGGTCTCGCC
AACCTGTTCC TTGACAATAC GGCGGCCGCC ATCGACGACC TCCAGATTGC GGTGCGGCTG
CGGCCCACCG ATGCCAACGC TGCGATCTGG CTGCACATTT CTCGCCTCCA TGCCAACACC
GTCGACAAAG ATGAATTCGC CACCAATGCC GCCAGAGTGA GCCGGGACGT GTGGCCTGGT
GCGGTGCTCG ATCTGTACCT GGGAGCACTG ACGCCGACCG AGATGCTCGA AAAGGCCCAA
GAAGGTGTTG AGCAAGACTC CGAGCGACGG CTTTGCGAGG CTCAGTTTTA TGTCGCCGAT
TATGGTATCC ACCGAGGCGC CACAAACGAG GCTTTGGACA TCATGAAGGG AGTTGTTTCG
CGTTGCCGCT CTTTTGCTCT TGTCTACGGC TCCGCACGGG CGGAGATCAG CTTGGCGCAG
CACTGA
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| Protein sequence | MDRCIRTLSV VCAATLVFAM TAAASATDTS EVARAAFQAK DRGQLLMAIG LFNQAMKDEQ
LSKKQRGLLL FGRGTAYQQL GITEAALTDL DGVVALLPDF PGGYAYRAVI WIAERRYGEA
LMDLQQAHQL APNDASVLLN LGNLYAQTGR LELAIENYGQ AIGLRPDFDK AYFDRAGAYM
VKHDFARAMA DFDKAIELRP TFADAIANRG ALHLANGNVE AALSDLNAAL ELAPRNARYY
DARANAYLVE ARYGDALADF DEALQIDPGN PALYFGRGLA NLFLDNTAAA IDDLQIAVRL
RPTDANAAIW LHISRLHANT VDKDEFATNA ARVSRDVWPG AVLDLYLGAL TPTEMLEKAQ
EGVEQDSERR LCEAQFYVAD YGIHRGATNE ALDIMKGVVS RCRSFALVYG SARAEISLAQ
H
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