| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0149 |
|---|
| Symbol | |
|---|
| ID | 5148772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009475 |
|---|
| Strand | + |
|---|
| Start bp | 112647 |
|---|
| End bp | 113537 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640539056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001220489 |
|---|
| Protein GI | 148240988 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACC AGCCGGGAAC GCCCACGGAA ACCTTGCCGC TCTCGAACAC CGAGCAGACG
CGCTCACGCG CGTATTCCCT GGCGGCACTC GATCAAGACT TCCTGCTTGG CGACTCCATG
CGTGGCGTGC GGTTCATGCT GGAATACGAA AAGGCGGAGG AGTTTCTGAG GTCGTGGGGT
GTACGGTCGA CCATCGTGGT CTTTGGATCG GCACGTGTTC GAGAGAACGG GCCGTCACGG
CACGCAAGAT GGTACAGAGA AGCACGCTCG TTCGCGCGCT TGGCTTCCGA ACGTGGAGGC
GCTCTGACCT CGAACGATGG CGTCCGCGAC AACGTCATTG CGACCGGAGG CGGTCCGGGG
ATTATGGAGG CCGCAAACCG AGGAGCAACC GAAGCGGGAG CGCCTTCCAT CGGCTTCAAT
ATCACCCTGC CGCAGGAGCA GCAGCCCAAT CCTTATTCCA CGCCGGAACT CACGTTTCAG
TTTCATTATT TCGCAATGCG AAAGATGCAC TTGGCCATGC GCGCAAATGC GCTTGTCGCA
TTCCCGGGAG GATTTGGCAC GTTTGACGAA CTATTCGAAA TCCTGACCTT GAGGCAGACG
AAAAAGTCGC CAGCCATCCC AATCGTGCTG TTCGACGAGC AATATTGGCG CTCTGCCGTC
AATTTTGAAG CGTTAATTGA GAGCGGCACG ATCGACAGAT CGGAATGCGA TCTTTTCCGC
TTCGCCGAAA CAGCGGAAGA TATATGGTCG AAGCTGCTTT CTTGCGGACT TGGCGTGCCG
GGTCTTTCCT GTAAGGCCTC GCATTTTAGT CATGTCAAAG CCTCGGATTC CGCCCTTCGG
CAAACCCTCG GCGGCAGTTC AGTCGCCTCA TCACGCGGGC CTTCATCGTG A
|
|---|
| Protein sequence | MDDQPGTPTE TLPLSNTEQT RSRAYSLAAL DQDFLLGDSM RGVRFMLEYE KAEEFLRSWG
VRSTIVVFGS ARVRENGPSR HARWYREARS FARLASERGG ALTSNDGVRD NVIATGGGPG
IMEAANRGAT EAGAPSIGFN ITLPQEQQPN PYSTPELTFQ FHYFAMRKMH LAMRANALVA
FPGGFGTFDE LFEILTLRQT KKSPAIPIVL FDEQYWRSAV NFEALIESGT IDRSECDLFR
FAETAEDIWS KLLSCGLGVP GLSCKASHFS HVKASDSALR QTLGGSSVAS SRGPSS
|
|---|
| |